Protein Alignment Rpn11 and rpn-11

DIOPT Version :9

• Sequence 1: NP_608905.1
• Gene: Rpn11 / 33738
• FlyBaseID: FBgn0028694
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_494712.1
• Gene: rpn-11 / 173744
• WormBaseID: WBGene00004467
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 308
• Identity: 231/308 - (75%)
• Similarity: 261/308 - (84%)
• Gaps: 4/308 - (1%)

  Fly     1 MDRLLRLGGAMPQ----AAPPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD 61
            |:|.|||||....    .|.|.|:..|||:|.|||||||||||||||||||||||||||||||||
 Worm     1 MERFLRLGGLGGNLGTFGANPQDSNQVDTSETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD 65

  Fly    62 DYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDIN 126
            ||||.|||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||
 Worm    66 DYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDIN 130

  Fly   127 TQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINPNMLVLGQEPRQTTSNLGHLQKPSVQALI 191
            |||||||||:|||||||||||||||||||||||.|||..:.|.|||||||||||||||||:||||
 Worm   131 TQQSFEALSDRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQALI 195

  Fly   192 HGLNRHYYSISINYRKNELEQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKS 256
            ||||||||||.|.||.::|||||||||:|.||.|.:::.:|::....|::.:..||.|||||.|:
 Worm   196 HGLNRHYYSIPIAYRTHDLEQKMLLNLNKLSWMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKA 260

  Fly   257 LEDEEKMTPEQLAIKNVGKQDPKRHLEEKVDKVMQNNIVQCLGAMLDT 304
            ||||:.||.::||||||||.|||||:.::|.|::.:||||.|..|:.|
 Worm   261 LEDEKNMTDQELAIKNVGKMDPKRHIADEVSKMLNDNIVQSLAGMMAT 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn11	NP_608905.1	MPN_RPN11_CSN5	19..284	CDD:163700	213/264 (81%)
rpn-11	NP_494712.1	MPN_RPN11_CSN5	23..288	CDD:163700	213/264 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160159775
Domainoid	1	1.000	217	1.000	Domainoid score	I1556
eggNOG	1	0.900	-	-		E1_COG1310
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H4240
Inparanoid	1	1.050	458	1.000	Inparanoid score	I880
Isobase	1	0.950	-	0.802101	Normalized mean entropy	S108
OMA	1	1.010	-	-		QHG53757
OrthoDB	1	1.010	-	-		D1031881at2759
OrthoFinder	1	1.000	-	-		FOG0004641
OrthoInspector	1	1.000	-	-		oto20565
orthoMCL	1	0.900	-	-		OOG6_101835
Panther	1	1.100	-	-	LDO	PTHR10410
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1200
SonicParanoid	1	1.000	-	-		X3258
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	16	15.790