DRSC/TRiP Functional Genomics Resources

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Protein Alignment senju and yicL

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_418116.1 Gene:yicL / 948176 ECOCYCID:EG11688 Length:307 Species:Escherichia coli


Alignment Length:318 Identity:61/318 - (19%)
Similarity:114/318 - (35%) Gaps:76/318 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QESNNSYGYNTVTVVLLTEVFKLIVSTCLYCRDNNLRSLVRDVQKDRNVLGLYMVPAFLYCLYNN 100
            ::|..|..:.|:|.::..   .||:.|..:...:.:.|::.: .||...|.::.|...|      
E. coli    30 EQSQMSSQFLTMTRLIFA---GLILLTLSFVHGDKIFSIINN-HKDAISLLIFSVVGAL------ 84

  Fly   101 LAFVNLATFDPTTYYLLLQLRVVVTGILFQIIFKKYLSQRQWISLIL-----LTLGCMMKQVDFG 160
              .|.|      |:.|.::.....|..:.|.:....:.  .|.||:.     :.:.|.:.....|
E. coli    85 --TVQL------TFLLTIEKSNAATATVLQFLSPTIIV--AWFSLVRKSRPGILVFCAILTSLVG 139

  Fly   161 SFYSDANDDSESAAIQQQLQSHNKTTSAETHAHGKNMSGFDFSLSAVFI-LAQTICSCLAGVYNE 224
            :|.               |.:|...||            ...|.:|:|. :|....:.....|..
E. coli   140 TFL---------------LVTHGNPTS------------LSISPAALFWGIASAFAAAFYTTYPS 177

  Fly   225 YLLKDKGADVNIFVQNVFMYLDSIVCNAVILLLRGELLDAFSPQNLGSIMRFSVLIIIVNNAAIG 289
            .|:...|   .:.|....|.:..::           ||..::.|....::..|:::.......||
E. coli   178 TLIARYG---TLPVVGWSMLIGGLI-----------LLPFYARQGTNFVVNGSLILAFFYLVVIG 228

  Fly   290 --IVTSFFLKYMNSILKTFASAL---ELLFTAVLCYFL----FSIPIYMNTALAIAVV 338
              :..|.:||....|....||.|   |.|.:|:|...|    |::|.::.|.|.::.|
E. coli   229 TSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSV 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 59/310 (19%)
yicLNP_418116.1 2A78 18..287 CDD:273359 61/318 (19%)

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