DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment senju and yddG

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_415990.5 Gene:yddG / 945942 ECOCYCID:EG12713 Length:293 Species:Escherichia coli


Alignment Length:278 Identity:57/278 - (20%)
Similarity:103/278 - (37%) Gaps:79/278 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VRDVQKDRNVLGLYMVPAFLYCLYNNLAFVNLATFDPTTYYLLLQLRVV------VTGILFQIIF 133
            :|.:.|...:.|..:..::..||..:|.:.       .|::..:::.:|      :| |||.|:|
E. coli    57 IRQIPKGYLLAGSLLFVSYEICLALSLGYA-------ATHHQAIEVGMVNYLWPSLT-ILFAILF 113

  Fly   134 KKYLSQRQWI---SLILLTLG-CMMKQVDFGSFYSDANDDSESAAIQQQLQSHNKTTSAETHAHG 194
            ..  .:..|:   .|:|..:| |.:...|.|..|.:.              .:|.|||.      
E. coli   114 NG--QKTNWLIVPGLLLALVGVCWVLGGDNGLHYDEI--------------INNITTSP------ 156

  Fly   195 KNMSGFDFSLSAVFILAQTICSCLAGVYNEYLLKDKGADVNIFVQN----VFMYL----DSIVCN 251
              :|.| .:....||.| ..|:    |.|:|.....|..|.:.:..    |:.:|    :.|...
E. coli   157 --LSYF-LAFIGAFIWA-AYCT----VTNKYARGFNGITVFVLLTGASLWVYYFLTPQPEMIFST 213

  Fly   252 AVILLLRGELLD---AFSPQNLGSIMRFSVLIIIVNNAAIGIVTSFFLKYMNSILKTFASALELL 313
            .|::.|......   |::..|:|         |:..|..|..|.|:|...::|.|.....:..|.
E. coli   214 PVMIKLISAAFTLGFAYAAWNVG---------ILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLS 269

  Fly   314 FT-----------AVLCY 320
            |:           ::||:
E. coli   270 FSFWQGALMVCGGSLLCW 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 57/278 (21%)
yddGNP_415990.5 PRK11689 2..292 CDD:183277 57/278 (21%)

Return to query results.
Submit another query.