DRSC/TRiP Functional Genomics Resources

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Protein Alignment senju and UTR3

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_563949.1 Gene:UTR3 / 837998 AraportID:AT1G14360 Length:331 Species:Arabidopsis thaliana


Alignment Length:205 Identity:43/205 - (20%)
Similarity:78/205 - (38%) Gaps:39/205 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 ETHAHGKNMSGFDFSLSAVFILAQTICSCLAGVYNEYL----------LKDKGADVNIFVQNVFM 243
            |:|..|         |..|.:|:    .|:||::..|:          .|..|.|...|....|:
plant     2 ESHGSG---------LRRVLLLS----FCVAGIWAAYIYQGILQETLSTKKFGEDGKRFEHLAFL 53

  Fly   244 YLDSIVCNAVILLLRGELLDAFSPQNLGSIMRFSVLIIIVNNA---AIGIVTSFFLKYMNSILKT 305
               ::..|.:.|:....::..:|....|....::.....:.|.   |:||....::.|...:|..
plant    54 ---NLAQNVICLVWSYIMIKLWSNGGSGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAK 115

  Fly   306 FASALELLFTAVLCYFL-FSIPIYMNTALAIAVVSYAIYLYTQSPVVN--------LGKVRPLSN 361
            .:..:.::....|.|.: :::|.|:.|.|....||....|.|.|..::        ||......|
plant   116 SSKMIPVMLMGSLVYGIRYTLPEYLCTFLVAGGVSMFALLKTSSKTISKLAHPNAPLGYGLCFLN 180

  Fly   362 LS-DATTKST 370
            |: |..|.:|
plant   181 LAFDGFTNAT 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 34/170 (20%)
UTR3NP_563949.1 UAA 16..318 CDD:462479 37/178 (21%)

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