DRSC/TRiP Functional Genomics Resources

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Protein Alignment senju and UTR2

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001190806.1 Gene:UTR2 / 828400 AraportID:AT4G23010 Length:392 Species:Arabidopsis thaliana


Alignment Length:185 Identity:37/185 - (20%)
Similarity:73/185 - (39%) Gaps:45/185 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STNWRELFPTKLTFVIFLLYMSLFIGQ-----------GIFVTASQESNNSYGYNTVTVVLLTEV 55
            :|....||.:.:..:.||....:..|:           .|...:.:|.|..:|:.:.::    ::
plant   197 TTQMEMLFCSTVVGLPFLFVPMVLTGEVFRAWTACAQSSILSESDKEWNLLFGFESTSI----DL 257

  Fly    56 FKLIVSTCLYCRDNNLRSLVRDVQKDRNVLGLYMVPAFLY-CLYNNLAFVNLAT----------- 108
            .:.::.|          .:...::|....:|      ||: .:|..|.|..:||           
plant   258 TRFMIQT----------GVGLSLEKKSKFVG------FLHPYVYGVLVFEAMATFIGQVSVLSLI 306

  Fly   109 --FDPTTYYLLLQLRVVVTGILFQIIFKKYLSQRQWISLILLTLGCMMKQVDFGS 161
              |...|..|:...|..||.:|..:||.|.|:::....|:|:.:|.::|.|...|
plant   307 ALFGAATTALITTARKGVTLLLSYLIFTKPLTEQHGSGLLLIAMGIVLKMVPMDS 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 27/132 (20%)
UTR2NP_001190806.1 UAA 22..359 CDD:462479 36/181 (20%)

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