DRSC/TRiP Functional Genomics Resources

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Protein Alignment senju and UTR6

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_567083.1 Gene:UTR6 / 825105 AraportID:AT3G59360 Length:405 Species:Arabidopsis thaliana


Alignment Length:389 Identity:107/389 - (27%)
Similarity:180/389 - (46%) Gaps:85/389 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLYMSLFIGQGIFVTASQESNNSYGYNTVTVVLLTEVFKL---IVSTCLYCR-----DNNLRSLV 75
            |:|||...|:             :.::.::|..|||:.|:   ||...:..|     :..|.|:.
plant    59 LVYMSKVDGK-------------FNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVS 110

  Fly    76 RDVQKDRNVLGLYMVPAFLYCLYNNLAFVNLATFDPTTYYLLLQLRVVVTGILFQIIFKKYLSQR 140
            ..||..||.: |..|||.||.:.|.|.|.....|:|.|..:|..|:|:|..:|.:::.|:..|..
plant   111 TFVQAARNNV-LLAVPALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSII 174

  Fly   141 QWISLILLTLGCMMKQVDFGSFYSDANDDSESAAIQQQLQSHNKTTSAETHAHGKNMSGFDFSLS 205
            ||.:|.||.:|..:.|:                          ::......|.|..::...:..:
plant   175 QWEALALLLIGISVNQL--------------------------RSLPEGATAIGIPLATGAYVCT 213

  Fly   206 AVFILAQTICSCLAGVYNEYLLKDKGADVNIFVQNVFMYLDSIVCNAV----ILLLRG----ELL 262
            .:|:   |:.| :|.|:|||.||.: .|.:|::||:|:|....:.|.:    .::.:|    ::|
plant   214 VIFV---TVPS-MASVFNEYALKSQ-YDTSIYLQNLFLYGYGAIFNFLGILGTVIYKGPGSFDIL 273

  Fly   263 DAFSPQNLGSIMRFSVLIIIVNNAAIGIVTSFFLKYMNSILKTFASALELLFTAVLCYFLFSIPI 327
            ...|.         :.:.:|:||||.||::|||.||.::|||.::|.:..:||.:....||...|
plant   274 QGHSR---------ATMFLILNNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHVI 329

  Fly   328 YMNTALAIAVVSYAIYLYTQSPVVNLGKVR----PLSNLSDATTKSTDKRKLIDEEAAESDLDM 387
            .||..|.|::|..:::.:. ||   |.|.|    ...||....||.|.:       |.||.::|
plant   330 TMNFLLGISIVFISMHQFF-SP---LAKARDEQQQNGNLELGNTKDTHR-------ANESFINM 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 88/317 (28%)
UTR6NP_567083.1 Nuc_sug_transp 62..343 CDD:398009 91/334 (27%)

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