DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment senju and slc35b3

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001035084.1 Gene:slc35b3 / 664769 ZFINID:ZDB-GENE-060312-46 Length:373 Species:Danio rerio


Alignment Length:393 Identity:81/393 - (20%)
Similarity:149/393 - (37%) Gaps:103/393 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PTKL------TFVIFLLYMSLFIGQGIFVTASQESNNSYG-YNTVTVVLLTEVFKLIVSTCLYCR 67
            ||:.      .|:.:|:|.  ::.:.||   |.|....:| |.|:.......:|.|:.       
Zfish    50 PTQFFICVAGVFLFYLIYG--YLQELIF---SVEGFKPFGWYLTLVQFGFYSLFGLVE------- 102

  Fly    68 DNNLRSLVRDVQKDRNVLGLYMVPAFLYC----LYN-NLAFVNLATFDPTTYYLLLQLRVVVTGI 127
                ..|.:| ::.|.....||:.|||..    |.| :|.::|..|                   
Zfish   103 ----LQLTQD-KRRRIPCKTYMIIAFLTVGTMGLSNTSLGYLNYPT------------------- 143

  Fly   128 LFQIIFKKYLSQRQWISLILLTLGCMMKQVDFGSFYSDANDDSESAAIQQQLQSHNKTTSAETHA 192
              |:|||       ...||.:.:|.:..|   |..|:.|:   .|||:...|.....|.:....|
Zfish   144 --QVIFK-------CCKLIPVMIGGVFIQ---GKRYNVAD---VSAALCMSLGLIWFTLADSKIA 193

  Fly   193 HGKNMSGFDFSLSAVFILAQTICSCLA-GVYNEYLLK---DKGADVNIFVQNV-FMYLDSIVCNA 252
            ...|::|       |.:::..:|:..| |...|..:|   ...:::.::..:: |:|:       
Zfish   194 PNFNVTG-------VLLISLALCADAAIGNVQEKAMKLHNGSNSEMVLYSYSIGFVYI------- 244

  Fly   253 VILLLRGELLDAFSPQNLGSIMRFSVL--IIIVNNAAIGIVTSFF-LKYMNSILKTFASALEL-- 312
                    ||...|...||..:.|...  :.....|.:..:|.:| :.::.:::|.|.:.:.:  
Zfish   245 --------LLGLLSLGGLGPAVSFCAQHPMTTYGYAFLFSLTGYFGISFVLALIKLFGALVAVTV 301

  Fly   313 -----LFTAVLCYFLFSIPIYMNTALAIAVVSYAIYLYTQSPVVNLGKVRPLSNLSDATTKSTDK 372
                 ..|.||.:..||.|..........:|.:.|:|...|.  |..|:: |.:|::...:....
Zfish   302 TTGRKAMTIVLSFLFFSKPFTFQYVWGGLLVVFGIFLNVYSK--NKDKMK-LPSLAELRKRVLSG 363

  Fly   373 RKL 375
            ||:
Zfish   364 RKV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 64/321 (20%)
slc35b3NP_001035084.1 UAA 52..343 CDD:462479 72/363 (20%)

Return to query results.
Submit another query.