DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment senju and slc35a3a

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001116721.1 Gene:slc35a3a / 559707 ZFINID:ZDB-GENE-081105-80 Length:328 Species:Danio rerio


Alignment Length:356 Identity:86/356 - (24%)
Similarity:157/356 - (44%) Gaps:59/356 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLYMSLFIGQGIFVTASQESNNSYG---------YNTVTVVLLTEVFKLIVSTCLYCRDNN---- 70
            |.|:||  |..:|.|.|......|.         |...:.|::.|..|::....|..::|:    
Zfish     6 LKYLSL--GVLVFQTTSLVLTMRYSRTLQGDGPRYLASSAVVVAEFLKILTCVGLVFKENSYSGR 68

  Fly    71 -LRSLVRD--VQKDRNVLGLYMVPAFLYCLYNNLAFVNLATFDPTTYYLLLQLRVVVTGILFQII 132
             |.|::|.  :.|....|.| .:|:.:|.|.|||.:|.|:..|..||.:..||:::.|.:....:
Zfish    69 ALSSIMRQEIIHKPVETLKL-AIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSM 132

  Fly   133 FKKYLSQRQWISLILLTLGCMMKQVDFGSFYSDANDDSESAAIQQQLQSHNKTTSAETHAHGKNM 197
            ..:.|...||:||::|..|     |.|..:.:|:..|.:...:                     .
Zfish   133 LGRRLGVYQWLSLLILMAG-----VAFVQWPTDSPADPQKEHL---------------------T 171

  Fly   198 SGFDFSLSAVFILAQTICSCLAGVYNEYLLKDKGADVNIFVQNVFMYLDSIVCNAVILLLRGELL 262
            :|..| :..|.:|.....|..||||.|.:||:  ...:::|:|:.:.|..:|.....:|    ..
Zfish   172 AGSQF-VGLVAVLVACCSSGFAGVYFEKILKE--TKQSVWVRNIQLGLFGLVFGVFGML----AY 229

  Fly   263 DAFSPQNLGSIMRFSVL--IIIVNNAAIGIVTSFFLKYMNSILKTFASALELLFTAVLCYFLFS- 324
            |....:..|....::.|  |::...|..|:|.:..:||.::|||.||::|.::.:.::.|||.. 
Zfish   230 DGDRVREHGMFQGYNTLTWIVVALQALGGLVIAAVIKYADNILKGFATSLSIILSTLISYFLLED 294

  Fly   325 ---IPIYMNTALAIAVVSYAIYLYTQSPVVN 352
               ..::...|:.:.:.:: :|.|...|..|
Zfish   295 FEPTSVFFLGAILVIMATF-LYGYENKPPSN 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 74/314 (24%)
slc35a3aNP_001116721.1 Nuc_sug_transp 2..316 CDD:398009 82/346 (24%)

Return to query results.
Submit another query.