DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment senju and Slc35b2

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001032292.1 Gene:Slc35b2 / 501103 RGDID:1565318 Length:431 Species:Rattus norvegicus


Alignment Length:377 Identity:74/377 - (19%)
Similarity:142/377 - (37%) Gaps:111/377 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NWRELFPTKLTFVIFLLYMSLFIGQGIFVTASQE--SNNSYGYNTVT----------VVLLTEVF 56
            :|:.|   ||.|....|.:| ::..|:.    ||  ...|||....:          :||:..|.
  Rat   106 SWQVL---KLVFCAAGLQVS-YLTWGVL----QERVMTGSYGATATSPGEHFTDSQFLVLMNRVL 162

  Fly    57 KLIVSTCLYCRDNNLRSLVRDVQKDRNVLGLYMVPAFLY------------CLYNNLAFVNLATF 109
            .|:|:. |||   .||...|           :..|.:.|            |.|..|.||:.   
  Rat   163 ALVVAG-LYC---ILRKQPR-----------HGAPMYRYSFASLSNVLSSWCQYEALKFVSF--- 209

  Fly   110 DPTTYYLLLQLRVVVTGILFQIIFKKYLSQRQWISLILLTLGCMMKQVDFGSFYSDANDDSESAA 174
              .|..|....:|:...::.:::.::.....::::..|:::|..|..:..|              
  Rat   210 --PTQVLAKASKVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLLSSG-------------- 258

  Fly   175 IQQQLQSHNKTTSAETHAHGKNMSGFDFSLSAVFILAQTIC-SCLAGVYNEYLLKDKGADVN-IF 237
              .:.:|...||                 ||.:.:||..|. ......:.:.|...|.:.|. :|
  Rat   259 --PEPRSSPATT-----------------LSGLVLLAGYIAFDSFTSNWQDALFAYKMSSVQMMF 304

  Fly   238 VQNVFMYLDSIVCNAVILLLRGELLDAFSPQNLGSIMRFSVLIIIVNNAAIGIVTSFFLKYMNSI 302
            ..|:|..|.::..    ||.:|.||:  ..:.:|....|::..::     :.:.::|...::...
  Rat   305 GVNLFSCLFTVGS----LLEQGALLE--GARFMGRHSEFALHALL-----LSVCSAFGQLFIFYT 358

  Fly   303 LKTFASALELLFTAVLCYFLFSIPIYMNTALAIAVVSYAIYLYTQSPVVNLG 354
            :..|.:|            :|:|.:.:..|:|| ::|..:|.:|.:.|..||
  Rat   359 IGQFGAA------------VFTIIMTLRQAIAI-LLSCLLYGHTVTVVGGLG 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 57/325 (18%)
Slc35b2NP_001032292.1 UAA 111..412 CDD:462479 72/369 (20%)

Return to query results.
Submit another query.