DRSC/TRiP Functional Genomics Resources

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Protein Alignment senju and Slc35a1

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001101394.2 Gene:Slc35a1 / 313139 RGDID:1311359 Length:336 Species:Rattus norvegicus


Alignment Length:374 Identity:94/374 - (25%)
Similarity:162/374 - (43%) Gaps:59/374 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LTFVIFLLYMSLFIGQGIFVTASQESNNSYG-YNTVTVVLLTEVFKLIVSTCLYCRDNNLRSLVR 76
            |.|.::.|.:...:.....:........:.| |.:.|.|.:|||.||::|..|..::..  ||.|
  Rat    10 LFFKLYCLTVMTLVAAAYTIALRYTRTTAEGLYFSTTAVCITEVIKLLISVGLLAKETG--SLGR 72

  Fly    77 -DVQKDRNVLG------LYMVPAFLYCLYNNLAFVNLATFDPTTYYLLLQLRVVVTGILFQIIFK 134
             ......||||      ...||:.:|.:.||:||:.|:..|...|.:..||::..|.:...::..
  Rat    73 FKASLSENVLGSPKELLKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLN 137

  Fly   135 KYLSQRQWISLILLTLGCMMKQVDFGSFYSDANDDSESAAIQQQLQSHNKTTSAETHAHGKNMSG 199
            :.||:.||||:.:|..|..:                    :|.:.....|...|:....|     
  Rat   138 RSLSKLQWISVFMLCGGVTL--------------------VQWKPAQATKVVVAQNPLLG----- 177

  Fly   200 FDFSLSAVFILAQTICSCLAGVYNEYLLKDKGADVNIFVQNVFMYLDSIVCNAVILLLRGELLDA 264
              |...|:.:|    ||..||||.|.:|  |.:|.:::|:|:.|||..|    .:.|....|.|.
  Rat   178 --FGAIAIAVL----CSGFAGVYFEKVL--KSSDTSLWVRNIQMYLSGI----AVTLAGTYLSDG 230

  Fly   265 FSPQNLGSIMRFS--VLIIIVNNAAIGIVTSFFLKYMNSILKTFASALELLFTAVLCYFLFSIPI 327
            ...:..|....::  |..:|...:..|:.||..:||.::|:|.|::|..::.:.|....||.:.|
  Rat   231 AEIKEKGFFYGYTYYVWFVIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTVASVILFGLQI 295

  Fly   328 YMNTALAIAVVSYAIYLYTQSPVVNLGKVRPLSNLSDATTKSTDKRKLI 376
            .::..|...:|..:||||.          .|..:.:....::|.|.::|
  Rat   296 TLSFTLGALLVCVSIYLYG----------LPRQDTTSIQQETTSKERII 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 85/310 (27%)
Slc35a1NP_001101394.2 Nuc_sug_transp 8..314 CDD:398009 89/342 (26%)

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