DRSC/TRiP Functional Genomics Resources

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Protein Alignment senju and nstp-3

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_504521.2 Gene:nstp-3 / 191128 WormBaseID:WBGene00022577 Length:344 Species:Caenorhabditis elegans


Alignment Length:355 Identity:92/355 - (25%)
Similarity:153/355 - (43%) Gaps:63/355 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SQESNNSYGYNTVTVVLLTEVFKLIVSTCLYCRDNNLRSLVRDVQKDRNVLGLYM---------- 89
            ::|.:|.: :.||.|.:: |:.|::|.:.:      :....:.|.|..|.|.|.:          
 Worm    34 AREDSNVF-FTTVNVFMM-EIIKVVVCSAI------MIYTTKSVMKYINELKLAIFEHRSETLKV 90

  Fly    90 -VPAFLYCLYNNLAFVNLATFDPTTYYLLLQLRVVVTGILFQIIFKKYLSQRQWISLILLTLGCM 153
             :||.:|.|.|||.::.|:..:.||:.:..|:::..|.|.......|.||.:||.:|:||.||. 
 Worm    91 CIPALIYTLQNNLYYIALSHLEATTFCISYQMKIFTTAIFMYFFLGKKLSTKQWWALVLLVLGV- 154

  Fly   154 MKQVDFGSFYS--DANDDSESAAIQQQLQSHNKTTSAETHAHGKNMSGFDFSLSAVFILAQTICS 216
               .|....||  .|::|.|.                      ..|.||      :.:|.....|
 Worm   155 ---ADIQYVYSPPPASEDVEQ----------------------NPMYGF------MAVLTMCFTS 188

  Fly   217 CLAGVYNEYLLKDKGADVNIFVQNVFMYLDSIVCNAVILLLRGELLDAFSPQNLGSIMRFSVLII 281
            ..||||.|.:||...|  :|:|||:.:.|..:..:.:.:....  .:..:.|.......|.|:.:
 Worm   189 AFAGVYLEKVLKSSNA--SIWVQNIRLALIGLPISFLSMWYYD--WEKINEQGAFRGWDFVVVCL 249

  Fly   282 IVNNAAIGIVTSFFLKYMNSILKTFASALELLFTAVLCYFLFSIPIYMNTALAIAVVSYAIYLYT 346
            .|.|:..||:.|..:||.::|||.:|.::.::..||..:.||.........|...:|..:|.:||
 Worm   250 TVTNSVGGILISVVIKYADNILKAYAQSMAIIGAAVGSWILFDFAPGFMFLLGTFMVIVSIIIYT 314

  Fly   347 QSPVVNLGKVRPLSNLSDATTKSTDKRKLI 376
            ..|.     ..|.|.|| |..||.....|:
 Worm   315 AFPY-----QEPESKLS-AYLKSQQNSSLL 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 79/314 (25%)
nstp-3NP_504521.2 Nuc_sug_transp 6..314 CDD:398009 81/323 (25%)

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