DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment senju and slc35a4

DIOPT Version :10

Sequence 1:NP_608902.1 Gene:senju / 33734 FlyBaseID:FBgn0031676 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001096322.1 Gene:slc35a4 / 100124906 XenbaseID:XB-GENE-958297 Length:321 Species:Xenopus tropicalis


Alignment Length:315 Identity:80/315 - (25%)
Similarity:143/315 - (45%) Gaps:54/315 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NNSYGYNTVTVVLLTEVFKLIVSTCLYCRDNNLRSLVRDVQKDR-----NVLGLYMVPAFLYCLY 98
            |....:::..||||.|:.|.::|...:        |::|.:..:     ::...|.|||.||...
 Frog    49 NGEIPFSSSAVVLLIELSKFVISLVFF--------LIQDWKSLKASVSWHLAAPYAVPAVLYGAN 105

  Fly    99 NNLAFVNLATFDPTTYYLLLQLRVVVTGILFQIIFKKYLSQRQWISLILLTLGCMMKQVDFGSFY 163
            |||........||:::.:|..|::|.|.:|:.:..::.||.|:|:|:.||...        |.||
 Frog   106 NNLVVYIQHFMDPSSFQVLSNLKIVSTAVLYSLFLRQRLSVRRWLSVFLLLAA--------GVFY 162

  Fly   164 SDANDDSESAAIQQQLQSHNKTTSAETHAHGKNMSGFDFSLSAVFILAQTICSCLAGVYNEYLLK 228
            |...           :|...| .|::|:.: ..:.|.      :.:||..:.|.|:.||.|..||
 Frog   163 SYGG-----------IQDLEK-VSSDTNLY-VTLPGL------LLMLAYCLISGLSAVYTEMTLK 208

  Fly   229 DKGADVNIFVQNVFMYLDSIVCNAVILLL---RGELLDAFSPQNLGSIMRFSVLIIIVNNAAIGI 290
            .:...:|  :||:::|...|:.|....|.   ..:..|.||         ..|.:||::.|..|:
 Frog   209 TQKIPLN--MQNLYLYSFGIIINLTAHLTSSKNSDFFDGFS---------VWVWVIILSQALNGL 262

  Fly   291 VTSFFLKYMNSILKTFASALELLFTAVLCYFLFSIPIYMNTALAIAVVSYAIYLY 345
            :.|..:|..|:|.:.|..:..:|....|.:.||.:.:.....||:.::..|:|:|
 Frog   263 IMSLVMKLSNNITRLFIISFSMLANGFLSFILFQLQLTALFFLAVVLIGLAVYMY 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
senjuNP_608902.1 Nuc_sug_transp 44..346 CDD:398009 79/310 (25%)
slc35a4NP_001096322.1 Nuc_sug_transp 54..317 CDD:398009 78/308 (25%)

Return to query results.
Submit another query.