Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009298585.1 | Gene: | col7a1l / 559516 | ZFINID: | ZDB-GENE-030131-9861 | Length: | 2161 | Species: | Danio rerio |
Alignment Length: | 998 | Identity: | 363/998 - (36%) |
---|---|---|---|
Similarity: | 451/998 - (45%) | Gaps: | 286/998 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 172 DGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGE--KGEPGWRGTAGLAGPQG---- 230
Fly 231 -FPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPG--------IKGEKGEPASSFP 286
Fly 287 VKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGST 351
Fly 352 GQKGDRGEPG--LNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGP-----R 409
Fly 410 GYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGH 474
Fly 475 PGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAA 539
Fly 540 GAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGY 604
Fly 605 PGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQG 669
Fly 670 FKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKG 734
Fly 735 DKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGP 799
Fly 800 PGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGL 864
Fly 865 QGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPG 929
Fly 930 IDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDK 994
Fly 995 GATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGL--P 1057
Fly 1058 GDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSG--IDGRDG 1120
Fly 1121 INGEKGEQGLQGVWGQPGEKGSV 1143 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Col4a1 | NP_723044.1 | Collagen | 104..161 | CDD:189968 | |
Collagen | 322..380 | CDD:189968 | 28/59 (47%) | ||
Collagen | 413..465 | CDD:189968 | 23/51 (45%) | ||
Collagen | 499..561 | CDD:189968 | 20/61 (33%) | ||
Collagen | 574..632 | CDD:189968 | 26/57 (46%) | ||
Collagen | 657..714 | CDD:189968 | 18/56 (32%) | ||
Collagen | 765..824 | CDD:189968 | 21/58 (36%) | ||
Collagen | 854..911 | CDD:189968 | 25/56 (45%) | ||
Collagen | 884..943 | CDD:189968 | 25/58 (43%) | ||
Collagen | 923..982 | CDD:189968 | 27/58 (47%) | ||
Collagen | 1028..1085 | CDD:189968 | 25/58 (43%) | ||
Collagen | 1229..1287 | CDD:189968 | |||
Collagen | 1318..1376 | CDD:189968 | |||
Collagen | 1399..1458 | CDD:189968 | |||
Collagen | 1477..1534 | CDD:189968 | |||
C4 | 1555..1662 | CDD:128421 | |||
C4 | 1663..1777 | CDD:128421 | |||
col7a1l | XP_009298585.1 | vWFA | 33..198 | CDD:294047 | |
FN3 | 236..327 | CDD:238020 | |||
fn3 | 330..410 | CDD:278470 | |||
fn3 | 422..487 | CDD:278470 | |||
fn3 | 509..581 | CDD:278470 | |||
fn3 | 604..678 | CDD:278470 | |||
FN3 | 698..781 | CDD:238020 | |||
fn3 | 785..862 | CDD:278470 | |||
vWFA | 954..1118 | CDD:294047 | |||
Collagen | 1208..1265 | CDD:189968 | 33/81 (41%) | ||
Collagen | 1316..1371 | CDD:189968 | 24/54 (44%) | ||
Collagen | 1403..1459 | CDD:189968 | 26/84 (31%) | ||
Collagen | 1439..1500 | CDD:189968 | 33/106 (31%) | ||
Collagen | 1503..1560 | CDD:189968 | 35/113 (31%) | ||
Collagen | 1542..1601 | CDD:189968 | 34/107 (32%) | ||
Collagen | 1683..1739 | CDD:189968 | 28/55 (51%) | ||
Collagen | 1722..1784 | CDD:189968 | 33/79 (42%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |