Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246651.1 | Gene: | Mp / 38769 | FlyBaseID: | FBgn0260660 | Length: | 1039 | Species: | Drosophila melanogaster |
Alignment Length: | 823 | Identity: | 230/823 - (27%) |
---|---|---|---|
Similarity: | 282/823 - (34%) | Gaps: | 342/823 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 450 PPGK---------KGEKGTAGLNGPKG-SI-GPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGI 503
Fly 504 PGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGG 568
Fly 569 KCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPG 633
Fly 634 ATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAP 698
Fly 699 GNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGN 763
Fly 764 KGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPG 828
Fly 829 KDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRG 893
Fly 894 DAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDR 958
Fly 959 GAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGD 1023
Fly 1024 QGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPG---PSGLRGDTGPAGTPG 1085
Fly 1086 WPGEKGLPGLAV-----------HGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQ--- 1136
Fly 1137 -PGEKGSVGAPGIPGAPGMDGL-----PGAAGAPGAVGYPGD------RGDKGEPGLSGLPGLKG 1189
Fly 1190 ETGPVGLQGFTGAPGPKGERGIRGQPGLPATV-PDIRGDKGSQ 1231 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Col4a1 | NP_723044.1 | Collagen | 104..161 | CDD:189968 | |
Collagen | 322..380 | CDD:189968 | |||
Collagen | 413..465 | CDD:189968 | 7/23 (30%) | ||
Collagen | 499..561 | CDD:189968 | 18/61 (30%) | ||
Collagen | 574..632 | CDD:189968 | 18/57 (32%) | ||
Collagen | 657..714 | CDD:189968 | 14/56 (25%) | ||
Collagen | 765..824 | CDD:189968 | 21/58 (36%) | ||
Collagen | 854..911 | CDD:189968 | 22/56 (39%) | ||
Collagen | 884..943 | CDD:189968 | 24/58 (41%) | ||
Collagen | 923..982 | CDD:189968 | 16/58 (28%) | ||
Collagen | 1028..1085 | CDD:189968 | 24/59 (41%) | ||
Collagen | 1229..1287 | CDD:189968 | 1/3 (33%) | ||
Collagen | 1318..1376 | CDD:189968 | |||
Collagen | 1399..1458 | CDD:189968 | |||
Collagen | 1477..1534 | CDD:189968 | |||
C4 | 1555..1662 | CDD:128421 | |||
C4 | 1663..1777 | CDD:128421 | |||
Mp | NP_001246651.1 | LamG | 58..222 | CDD:304605 | |
Collagen | 378..432 | CDD:189968 | 28/89 (31%) | ||
Collagen | 464..518 | CDD:189968 | 35/119 (29%) | ||
Collagen | 494..615 | CDD:189968 | 71/238 (30%) | ||
Endostatin-like | 831..999 | CDD:238151 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45461340 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |