Protein Alignment Col4a1 and Col9a3

DIOPT Version :10

• Sequence 1: NP_723044.1
• Gene: Col4a1 / 33727
• FlyBaseID: FBgn0000299
• Length: 1779
• Species: Drosophila melanogaster
• Sequence 2: NP_001102081.2
• Gene: Col9a3 / 362285
• RGDID: 1310255
• Length: 680
• Species: Rattus norvegicus
• Alignment Length: 922
• Identity: 340/922 - (36%)
• Similarity: 409/922 - (44%)
• Gaps: 283/922 - (30%)

  Fly   592 KDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDK 656
            |.|.|||||.:|.||:.|.|||:|:.|||
  Rat    23 KVGPRGPPGPQGPPGKPGKDGIDGEAGPP------------------------------------ 51

  Fly   657 GYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIK 721
                              ||||.||||               |..|.||:.|..|.||:||..
  Rat    52 ------------------GLPGPPGPK---------------GTSGKPGKPGEAGLPGLPGVD-- 81

  Fly   722 GEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERG 786
               |..||||..|.||:.|..|..|.||.        |..|.|      |:||||||.|..|..|
  Rat    82 ---GLTGRDGPAGPKGAPGERGSLGPPGP--------PGLGGK------GLPGPPGEAGVSGLPG 129

  Fly   787 YTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGE---- 847
            ..||:|..||.|.||:.||.|..||            |||||             ..|.|.
  Rat   130 GIGLRGPPGPSGLPGLPGPPGPPGP------------PGNPG-------------VLPEGATDLQ 169

  Fly   848 -PGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKG 911
             |.|..|||.||||:.|.:         ||.|:.|..|.||..|::|:.|.||..|.||.||.:
  Rat   170 CPAICPPGPPGPPGMPGFK---------GPTGYKGEQGEVGKDGEKGNPGPPGPPGIPGTVGLQ- 224

  Fly   912 DVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAP 976
                 ||.|:.|.||..|..|.||..|.:|.||.||..|..|::|||      ||:||.|..|..
  Rat   225 -----GPRGLQGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRGDR------GPEGFRGPKGDL 278

  Fly   977 GKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGE 1041
            |:.||.|||||:|..|:.|..|..|.|         |.|||.|.||:.|..||||::|.:|:
  Rat   279 GRPGPKGIPGVAGPGGEPGMPGKDGKD---------GVPGLDGEKGEAGRTGAPGEKGPNGL--- 331

  Fly  1042 KGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGE 1106
                        |||||.|..||:|||.|.:|..|:.||:|.||.||:.|:|
  Rat   332 ------------PGLPGRAGSKGEKGEVGRTGELGEAGPSGEPGIPGDVGVP------------- 371

  Fly  1107 KGDQGRSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPG 1171
                            ||:||         .|.:|||||.|..|.|         ||||..|:.|
  Rat   372 ----------------GERGE---------AGHRGSVGALGPQGPP---------GAPGIRGFQG 402

  Fly  1172 DRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGY 1236
            .:|..|:|||.|..||:|:   ||.:|..||.||||::||.|..|||       ||||..|..|.
  Rat   403 QKGSIGDPGLPGPQGLRGD---VGDRGPGGATGPKGDQGIAGSDGLP-------GDKGELGPNGP 457

  Fly  1237 TGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGL 1301
            .|:|||.|.||..||         :|:|||.|.||:.|:||..|.:|.:|..|.||:|  |:.|:
  Rat   458 VGQKGESGSRGELGP---------KGIQGPNGTSGVQGVPGPPGPLGFQGVQGVPGIT--GKPGV 511

  Fly  1302 PGRPGRNGR-QGLIGAPGLIGERGLPGLAGE------PGLVGLPGPIGPAGSKGERGLAGSPGQP 1359
            ||:.....| :.|.|  |:|.|: :..||..      ||.:|.|||.||         .|.||.|
  Rat   512 PGKEASEQRIRELCG--GMISEQ-IAQLAAHLRKPLAPGSIGRPGPAGP---------PGPPGPP 564

  Fly  1360 GQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGN 1424
            |..|.|||.|..|..||.|..|:.|..|.:|.:||||..|:       ||.|..||.||
  Rat   565 GSIGHPGARGPPGYRGPTGELGDPGPRGSQGDRGDKGAIGV-------GLDGPAGDQGY------ 616

  Fly  1425 DGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERG 1489
            .||.|.||    ....||||..|.||||               |:||.||..|.:|.||......
  Rat   617 RGPQGVPG----ISKDGRDGAHGEPGLP---------------GDPGLPGAAGAQGTPGICDTSA 662

  Fly  1490 LIG-IQGERGEK 1500
            ..| :.|..|||
  Rat   663 CQGAVLGGGGEK 674

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Col4a1	NP_723044.1	gly_rich_SclB	<107..>361	CDD:468478
		gly_rich_SclB	<355..>642	CDD:468478	18/49 (37%)
		gly_rich_SclB	<543..820	CDD:468478	75/227 (33%)
		gly_rich_SclB	<727..>968	CDD:468478	95/245 (39%)
		gly_rich_SclB	<969..>1218	CDD:468478	95/248 (38%)
		gly_rich_SclB	<1186..>1420	CDD:468478	100/240 (42%)
		gly_rich_SclB	<1321..>1547	CDD:468478	69/187 (37%)
		C4	1555..1662	CDD:128421
		C4	1663..1777	CDD:128421
Col9a3	NP_001102081.2	gly_rich_SclB	<64..>335	CDD:468478	139/359 (39%)
		gly_rich_SclB	<310..>514	CDD:468478	112/286 (39%)