| Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_872268.1 | Gene: | col-171 / 353463 | WormBaseID: | WBGene00000744 | Length: | 307 | Species: | Caenorhabditis elegans |
| Alignment Length: | 249 | Identity: | 91/249 - (36%) |
|---|---|---|---|
| Similarity: | 102/249 - (40%) | Gaps: | 58/249 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 344 NFGPPGSTGQKGDRG-EPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPG-----P 402
Fly 403 PGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKG 467
Fly 468 SI----GPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDS 528
Fly 529 KLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVG--GKCSSC---RAGP 577 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Col4a1 | NP_723044.1 | gly_rich_SclB | <107..>361 | CDD:468478 | 7/17 (41%) |
| gly_rich_SclB | <355..>642 | CDD:468478 | 86/238 (36%) | ||
| gly_rich_SclB | <543..820 | CDD:468478 | 17/40 (43%) | ||
| gly_rich_SclB | <727..>968 | CDD:468478 | |||
| gly_rich_SclB | <969..>1218 | CDD:468478 | |||
| gly_rich_SclB | <1186..>1420 | CDD:468478 | |||
| gly_rich_SclB | <1321..>1547 | CDD:468478 | |||
| C4 | 1555..1662 | CDD:128421 | |||
| C4 | 1663..1777 | CDD:128421 | |||
| col-171 | NP_872268.1 | Col_cuticle_N | 24..76 | CDD:198156 | |
| gly_rich_SclB | <133..>293 | CDD:468478 | 73/202 (36%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||