Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021333076.1 | Gene: | col4a5 / 323561 | ZFINID: | ZDB-GENE-030131-2281 | Length: | 1685 | Species: | Danio rerio |
Alignment Length: | 1835 | Identity: | 821/1835 - (44%) |
---|---|---|---|
Similarity: | 975/1835 - (53%) | Gaps: | 282/1835 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 SAGVARGDLPPKNCTAGYAGC--VPKCIAE-----KGNRGLPGPLGPTGLKGEMGFPGMEGPSGD 117
Fly 118 KGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQ------DGIPG 176
Fly 177 LEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDS 241
Fly 242 GPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEP 306
Fly 307 GLVGRKGEPGPEGDTG-LDG------QKGEKGLPGGPGDRGRQGNFGPPG-STGQKGDRGEPGLN 363
Fly 364 GLPGNPGQKGEPGRAGATGKPGLLGPPGPPG-----GGRGTPGPPGPK-------------GPRG 410
Fly 411 YVGAPGPQGLNGVDGLPGPQGYNGQKG--GAGLPGRPGNEGPPGKKGEKGTAGLNG---PKGSIG 470
Fly 471 PIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGT 535
Fly 536 PGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPG 600
Fly 601 ERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSL--IEPLKGDKGYPGAPG 663
Fly 664 AKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHG 728
Fly 729 RDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGP---PGEDGSPGERGYTGL 790
Fly 791 KGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGN---PGKDGLRGIPGRNGQPGPRGEPGISR 852
Fly 853 PGPMGP---PGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVG 914
Fly 915 PIGPAGVAGPPGVP--GIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGP--KGFAGVTGA 975
Fly 976 PGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGP---------PGAPGLMGIKGDQGLAGAPG 1031
Fly 1032 QQGLDGMPGEKGNQGFPGLDGPPGLPGDASE-KGQKGE------PGPSGLRGDTGPAGTPGWPGE 1089
Fly 1090 KGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEK---GEQGLQGVWGQPGEKGSVGAPGIPGA 1151
Fly 1152 PGMDGLPGAAGAPGAVGY--PGDRGDKGEPGLSGLP---GLKGETGPVGLQGFTGAPGPKGERGI 1211
Fly 1212 RGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIP 1276
Fly 1277 GAKGDI------GPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLV 1335
Fly 1336 GLPGPIGPAGS--------KGERGLAGSPGQPGQDGFP----GAPGLKGDTGPQGFKGERGLNGF 1388
Fly 1389 EGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPG 1453
Fly 1454 QKGEPGMLPPPGPKGEPGQP----GRNGPKGEPGRPGER------GLIGIQGERGEKGERGLIGE 1508
Fly 1509 TGNVGRPGPKGD---RGEPGERGYEGAIGLIGQKGEPGAPAPAALDYLTGILITRHSQSETVPAC 1570
Fly 1571 SAGHTELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTT 1635
Fly 1636 NAAIP--MMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVG 1698
Fly 1699 NGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1763
Fly 1764 RQSHVSRCQVCMKNS 1778 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Col4a1 | NP_723044.1 | Collagen | 104..161 | CDD:189968 | 31/56 (55%) |
Collagen | 322..380 | CDD:189968 | 33/65 (51%) | ||
Collagen | 413..465 | CDD:189968 | 29/56 (52%) | ||
Collagen | 499..561 | CDD:189968 | 19/61 (31%) | ||
Collagen | 574..632 | CDD:189968 | 23/57 (40%) | ||
Collagen | 657..714 | CDD:189968 | 25/56 (45%) | ||
Collagen | 765..824 | CDD:189968 | 29/61 (48%) | ||
Collagen | 854..911 | CDD:189968 | 26/59 (44%) | ||
Collagen | 884..943 | CDD:189968 | 24/60 (40%) | ||
Collagen | 923..982 | CDD:189968 | 31/62 (50%) | ||
Collagen | 1028..1085 | CDD:189968 | 29/63 (46%) | ||
Collagen | 1229..1287 | CDD:189968 | 26/63 (41%) | ||
Collagen | 1318..1376 | CDD:189968 | 28/69 (41%) | ||
Collagen | 1399..1458 | CDD:189968 | 27/58 (47%) | ||
Collagen | 1477..1534 | CDD:189968 | 30/65 (46%) | ||
C4 | 1555..1662 | CDD:128421 | 61/108 (56%) | ||
C4 | 1663..1777 | CDD:128421 | 66/113 (58%) | ||
col4a5 | XP_021333076.1 | Collagen | 50..109 | CDD:189968 | 34/61 (56%) |
Collagen | 86..145 | CDD:189968 | 28/58 (48%) | ||
Collagen | 284..341 | CDD:189968 | 29/56 (52%) | ||
Collagen | 891..948 | CDD:189968 | 27/59 (46%) | ||
Collagen | 1080..1137 | CDD:189968 | 30/78 (38%) | ||
Collagen | 1110..1167 | CDD:189968 | 29/78 (37%) | ||
Collagen | 1285..1342 | CDD:189968 | 25/59 (42%) | ||
C4 | 1462..1568 | CDD:307529 | 58/105 (55%) | ||
C4 | 1572..1682 | CDD:307529 | 63/110 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1311 | 1.000 | Inparanoid score | I148 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 1 | 1.100 | - | - | O | PTHR24023 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1239 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.870 |