| Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001370098.1 | Gene: | col-93 / 259335 | WormBaseID: | WBGene00000668 | Length: | 304 | Species: | Caenorhabditis elegans |
| Alignment Length: | 286 | Identity: | 102/286 - (35%) |
|---|---|---|---|
| Similarity: | 117/286 - (40%) | Gaps: | 82/286 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 330 KGLPGGPGDRGRQGNFG-----PPGSTGQKGDRGE----PGLNGLPGNPGQKGEPGRAGATGKPG 385
Fly 386 LLG-PPGPPGGGRGTPGP--PGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGN 447
Fly 448 EGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGS 512
Fly 513 KGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGP 577
Fly 578 KGDKGTSGLPGIPGKDGARGPPGERG 603 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Col4a1 | NP_723044.1 | gly_rich_SclB | <107..>361 | CDD:468478 | 9/39 (23%) |
| gly_rich_SclB | <355..>642 | CDD:468478 | 94/256 (37%) | ||
| gly_rich_SclB | <543..820 | CDD:468478 | 18/61 (30%) | ||
| gly_rich_SclB | <727..>968 | CDD:468478 | |||
| gly_rich_SclB | <969..>1218 | CDD:468478 | |||
| gly_rich_SclB | <1186..>1420 | CDD:468478 | |||
| gly_rich_SclB | <1321..>1547 | CDD:468478 | |||
| C4 | 1555..1662 | CDD:128421 | |||
| C4 | 1663..1777 | CDD:128421 | |||
| col-93 | NP_001370098.1 | Col_cuticle_N | 12..64 | CDD:198156 | |
| gly_rich_SclB | <107..>283 | CDD:468478 | 92/245 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||