| Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_504735.1 | Gene: | col-141 / 188515 | WormBaseID: | WBGene00000714 | Length: | 314 | Species: | Caenorhabditis elegans |
| Alignment Length: | 235 | Identity: | 89/235 - (37%) |
|---|---|---|---|
| Similarity: | 99/235 - (42%) | Gaps: | 68/235 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 346 GPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGA-----TGKPGL-----LGPPGPPGGGRGTP 400
Fly 401 GPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGP 465
Fly 466 KGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKL 530
Fly 531 GRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKC 570 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Col4a1 | NP_723044.1 | gly_rich_SclB | <107..>361 | CDD:468478 | 8/14 (57%) |
| gly_rich_SclB | <355..>642 | CDD:468478 | 84/226 (37%) | ||
| gly_rich_SclB | <543..820 | CDD:468478 | 13/28 (46%) | ||
| gly_rich_SclB | <727..>968 | CDD:468478 | |||
| gly_rich_SclB | <969..>1218 | CDD:468478 | |||
| gly_rich_SclB | <1186..>1420 | CDD:468478 | |||
| gly_rich_SclB | <1321..>1547 | CDD:468478 | |||
| C4 | 1555..1662 | CDD:128421 | |||
| C4 | 1663..1777 | CDD:128421 | |||
| col-141 | NP_504735.1 | Col_cuticle_N | 13..64 | CDD:198156 | |
| gly_rich_SclB | <114..>271 | CDD:468478 | 79/214 (37%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||