DRSC/TRiP Functional Genomics Resources

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Protein Alignment Col4a1 and col-154

DIOPT Version :10

Sequence 1:NP_723044.1 Gene:Col4a1 / 33727 FlyBaseID:FBgn0000299 Length:1779 Species:Drosophila melanogaster
Sequence 2:NP_505886.1 Gene:col-154 / 186300 WormBaseID:WBGene00000727 Length:299 Species:Caenorhabditis elegans


Alignment Length:13 Identity:7/13 - (53%)
Similarity:9/13 - (69%) Gaps:2/13 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 CNS--VHAPRSPF 53
            ||:  |||.||.:
 Worm   924 CNAHVVHADRSEY 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Col4a1NP_723044.1 gly_rich_SclB <107..>361 CDD:468478
gly_rich_SclB <355..>642 CDD:468478
gly_rich_SclB <543..820 CDD:468478
gly_rich_SclB <727..>968 CDD:468478
gly_rich_SclB <969..>1218 CDD:468478
gly_rich_SclB <1186..>1420 CDD:468478
gly_rich_SclB <1321..>1547 CDD:468478
C4 1555..1662 CDD:128421
C4 1663..1777 CDD:128421
col-154NP_505886.1 Col_cuticle_N 12..64 CDD:198156
gly_rich_SclB <84..>273 CDD:468478
Blue background indicates that the domain is not in the aligned region.

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