| Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_505646.1 | Gene: | col-149 / 179431 | WormBaseID: | WBGene00000722 | Length: | 297 | Species: | Caenorhabditis elegans |
| Alignment Length: | 205 | Identity: | 88/205 - (42%) |
|---|---|---|---|
| Similarity: | 99/205 - (48%) | Gaps: | 35/205 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 534 GTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDV----GGKCSSCRAGPKGDKGTSGLPGIPGKDG 594
Fly 595 ARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGY- 658
Fly 659 -PGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKG 722
Fly 723 EPGFHGRDGA 732 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Col4a1 | NP_723044.1 | gly_rich_SclB | <107..>361 | CDD:468478 | |
| gly_rich_SclB | <355..>642 | CDD:468478 | 51/111 (46%) | ||
| gly_rich_SclB | <543..820 | CDD:468478 | 83/196 (42%) | ||
| gly_rich_SclB | <727..>968 | CDD:468478 | 3/6 (50%) | ||
| gly_rich_SclB | <969..>1218 | CDD:468478 | |||
| gly_rich_SclB | <1186..>1420 | CDD:468478 | |||
| gly_rich_SclB | <1321..>1547 | CDD:468478 | |||
| C4 | 1555..1662 | CDD:128421 | |||
| C4 | 1663..1777 | CDD:128421 | |||
| col-149 | NP_505646.1 | Col_cuticle_N | 6..58 | CDD:198156 | |
| gly_rich_SclB | <151..>280 | CDD:468478 | 70/157 (45%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||