Protein Alignment Col4a1 and bli-6

DIOPT Version :10

• Sequence 1: NP_723044.1
• Gene: Col4a1 / 33727
• FlyBaseID: FBgn0000299
• Length: 1779
• Species: Drosophila melanogaster
• Sequence 2: NP_741423.1
• Gene: bli-6 / 177399
• WormBaseID: WBGene00000256
• Length: 297
• Species: Caenorhabditis elegans
• Alignment Length: 264
• Identity: 101/264 - (38%)
• Similarity: 122/264 - (46%)
• Gaps: 54/264 - (20%)

  Fly   204 KENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMK 268
            :.|....:...|:.|..|:||.||           |........||.|..|..|:.|.    |.|
 Worm    68 RSNRTARQASYGDSGAAGSAGAAG-----------GSCSGCCLPGPAGPVGTPGKPGR----PGK 117

  Fly   269 PGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLP 333
            ||..|:.|..|.|    |..|...:..|......:|.||:   :|.|||.||.|||||      |
 Worm   118 PGVAGLPGNPGRP----PQAPCDPITPPPCKPCPQGPPGV---QGPPGPAGDAGLDGQ------P 169

  Fly   334 GGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRG 398
            ||||.         .|..||.|.:|.||:||.||.|||.|.||: .|..:|  |.|        |
 Worm   170 GGPGQ---------DGQPGQPGPKGPPGVNGQPGAPGQDGNPGQ-DAPSEP--LVP--------G 214

  Fly   399 TPGPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLN 463
            .||.||..||:|..|.||..|.||..|.|||:|.:||      ||:||::|.||..|:.|.||..
 Worm   215 EPGAPGEAGPQGPPGQPGTPGQNGQPGQPGPKGPSGQ------PGQPGSDGNPGPAGQAGQAGSV 273

  Fly   464 GPKG 467
            |.||
 Worm   274 GEKG 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Col4a1	NP_723044.1	gly_rich_SclB	<107..>361	CDD:468478	50/156 (32%)
		gly_rich_SclB	<355..>642	CDD:468478	53/113 (47%)
		gly_rich_SclB	<543..820	CDD:468478
		gly_rich_SclB	<727..>968	CDD:468478
		gly_rich_SclB	<969..>1218	CDD:468478
		gly_rich_SclB	<1186..>1420	CDD:468478
		gly_rich_SclB	<1321..>1547	CDD:468478
		C4	1555..1662	CDD:128421
		C4	1663..1777	CDD:128421
bli-6	NP_741423.1	Col_cuticle_N	12..64	CDD:198156
		gly_rich_SclB	<101..>277	CDD:468478	90/218 (41%)