Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001022662.2 | Gene: | emb-9 / 176314 | WormBaseID: | WBGene00001263 | Length: | 1759 | Species: | Caenorhabditis elegans |
Alignment Length: | 1813 | Identity: | 810/1813 - (44%) |
---|---|---|---|
Similarity: | 973/1813 - (53%) | Gaps: | 173/1813 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 58 VDSAGVARGDLPPKNCTAGYAGCVPKCIAEKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKG 122
Fly 123 DPGPYGQRGD------KGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLS 181
Fly 182 GMPGPRGYAGQLGSKGEKGEPAK--ENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPY 244
Fly 245 GAKGPRGEHGLKGEKGASCYGPMK-----PGAPGIKGEKGE-PASSFPVKPTHTVMGPRGDMGQK 303
Fly 304 GEPGLVGRKGEPGPEGDTGLDGQ------KGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGL 362
Fly 363 NGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGG-GRGTPGPPGPKGPRGYVGAPGPQGLNGVDGL 426
Fly 427 PGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPG 491
Fly 492 YGIQGS---KGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGT 553
Fly 554 PGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTG 618
Fly 619 PPGEKGEDGRTGLPGATGEPGKPALCDLS--LIEP---------LKGDKGYPGAPGAKGVQGFKG 672
Fly 673 AEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPG--FHGRDGAKGD 735
Fly 736 KGSFGRSGEKGEPGSCALDEIKMPAK-GNK--GEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQ 797
Fly 798 GPPGVEGPRGLN------------GPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGI 850
Fly 851 SRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGAD---GSVGYPGDRGDAGLPGVSGRPGIVGEKGD 912
Fly 913 VGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPG 977
Fly 978 KRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEK 1042
Fly 1043 GNQGFPGLDGPPGLPGDASEKGQKGEPG-PSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGP--- 1103
Fly 1104 --PGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGA------ 1160
Fly 1161 ------AGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIRGQPGLPA 1219
Fly 1220 TVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGP 1284
Fly 1285 RGEIGYPGV---TIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGS 1346
Fly 1347 KGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVG 1411
Fly 1412 QK---GDTGYPGLNGNDGPVGAPGERGFTGPKGRD---GRDGTPGLPGQKGEPGMLPPPGP---- 1466
Fly 1467 -KGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRPGPKGDRGEPGERGYE 1530
Fly 1531 GAIGLIGQKGEPGAP----APAALDYLTGILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDY 1591
Fly 1592 AHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAI-PMM-PVENIEIRQYIS 1654
Fly 1655 RCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRAT 1719
Fly 1720 PFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKN 1777 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Col4a1 | NP_723044.1 | Collagen | 104..161 | CDD:189968 | 29/62 (47%) |
Collagen | 322..380 | CDD:189968 | 31/63 (49%) | ||
Collagen | 413..465 | CDD:189968 | 26/51 (51%) | ||
Collagen | 499..561 | CDD:189968 | 24/61 (39%) | ||
Collagen | 574..632 | CDD:189968 | 24/57 (42%) | ||
Collagen | 657..714 | CDD:189968 | 25/56 (45%) | ||
Collagen | 765..824 | CDD:189968 | 28/70 (40%) | ||
Collagen | 854..911 | CDD:189968 | 27/59 (46%) | ||
Collagen | 884..943 | CDD:189968 | 27/58 (47%) | ||
Collagen | 923..982 | CDD:189968 | 27/58 (47%) | ||
Collagen | 1028..1085 | CDD:189968 | 24/57 (42%) | ||
Collagen | 1229..1287 | CDD:189968 | 23/57 (40%) | ||
Collagen | 1318..1376 | CDD:189968 | 32/57 (56%) | ||
Collagen | 1399..1458 | CDD:189968 | 31/64 (48%) | ||
Collagen | 1477..1534 | CDD:189968 | 23/56 (41%) | ||
C4 | 1555..1662 | CDD:128421 | 58/108 (54%) | ||
C4 | 1663..1777 | CDD:128421 | 65/113 (58%) | ||
emb-9 | NP_001022662.2 | Collagen | 61..119 | CDD:189968 | 25/57 (44%) |
Collagen | 97..154 | CDD:189968 | 28/56 (50%) | ||
Collagen | 267..325 | CDD:189968 | 27/60 (45%) | ||
Collagen | 357..417 | CDD:189968 | 31/60 (52%) | ||
Collagen | 391..451 | CDD:189968 | 29/60 (48%) | ||
Collagen | 423..485 | CDD:189968 | 27/61 (44%) | ||
Collagen | 473..535 | CDD:189968 | 24/62 (39%) | ||
Collagen | 655..717 | CDD:189968 | 28/63 (44%) | ||
Collagen | 731..789 | CDD:189968 | 24/60 (40%) | ||
Collagen | 841..900 | CDD:189968 | 27/58 (47%) | ||
Collagen | 895..953 | CDD:189968 | 26/57 (46%) | ||
Collagen | 984..1041 | CDD:189968 | 26/56 (46%) | ||
Collagen | 1107..1166 | CDD:189968 | 26/61 (43%) | ||
Collagen | 1143..1202 | CDD:189968 | 31/61 (51%) | ||
Collagen | 1194..1249 | CDD:189968 | 23/58 (40%) | ||
Collagen | 1346..1405 | CDD:189968 | 27/67 (40%) | ||
Collagen | 1379..1437 | CDD:189968 | 32/69 (46%) | ||
Collagen | 1468..1527 | CDD:189968 | 22/58 (38%) | ||
C4 | 1536..1642 | CDD:279721 | 55/105 (52%) | ||
C4 | 1645..1758 | CDD:128421 | 65/113 (58%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H1390 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24023 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1239 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.920 |