| Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_496310.1 | Gene: | col-80 / 174652 | WormBaseID: | WBGene00000656 | Length: | 317 | Species: | Caenorhabditis elegans |
| Alignment Length: | 221 | Identity: | 92/221 - (41%) |
|---|---|---|---|
| Similarity: | 99/221 - (44%) | Gaps: | 52/221 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 388 GPPGPPG--GGRGTPGPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGP 450
Fly 451 PGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGE 515
Fly 516 RGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGD 580
Fly 581 KGTSGLPGIPGKDGARGPPGERGYPG 606 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Col4a1 | NP_723044.1 | gly_rich_SclB | <107..>361 | CDD:468478 | |
| gly_rich_SclB | <355..>642 | CDD:468478 | 92/221 (42%) | ||
| gly_rich_SclB | <543..820 | CDD:468478 | 23/64 (36%) | ||
| gly_rich_SclB | <727..>968 | CDD:468478 | |||
| gly_rich_SclB | <969..>1218 | CDD:468478 | |||
| gly_rich_SclB | <1186..>1420 | CDD:468478 | |||
| gly_rich_SclB | <1321..>1547 | CDD:468478 | |||
| C4 | 1555..1662 | CDD:128421 | |||
| C4 | 1663..1777 | CDD:128421 | |||
| col-80 | NP_496310.1 | Col_cuticle_N | 4..56 | CDD:198156 | |
| gly_rich_SclB | <101..>264 | CDD:468478 | 85/212 (40%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||