Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001837.2 | Gene: | COL4A2 / 1284 | HGNCID: | 2203 | Length: | 1712 | Species: | Homo sapiens |
Alignment Length: | 1897 | Identity: | 820/1897 - (43%) |
---|---|---|---|
Similarity: | 966/1897 - (50%) | Gaps: | 328/1897 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 ALVGADAQFWKTAG--TAGSIQDSVKHYNRNEPKFPIDDSYDIVDSAGVARGDLP--PKNCTAGY 77
Fly 78 AGCVPKCIAEKGNRGLPGPLGPTGLKGE---MGFPGMEGPSGDKGQKGDPGPYGQRGDKGER--- 136
Fly 137 GSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGE 201
Fly 202 P---AKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASC 263
Fly 264 YGPMKPGAPGIKGEKGEPA-SSFPVKPTHTVMGP----------RGDMGQKGEPGL--VGRKGEP 315
Fly 316 GPEGDTGL---DGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGL------------ 365
Fly 366 ----PGNPGQKGEPGRAGATGKPGLLGPPG-PPGGGRGTPGPPGPKGPRGYVGAPGPQGLNGVDG 425
Fly 426 LPGPQGYNGQKGGAGLPGRPGNEG-PPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGL 489
Fly 490 PGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTP 554
Fly 555 GQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGP 619
Fly 620 PGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKG 684
Fly 685 EFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQ-----SIKGEPGFHGRDGAKGDKGSFGRSGE 744
Fly 745 KGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLN 809
Fly 810 GPR---GEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGI---SRPGPMGPPGLNGLQGEK 868
Fly 869 GDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGV 933
Fly 934 RGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATG 998
Fly 999 LTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEK 1063
Fly 1064 GQKGEPGPSGLRGDTGPAGTPG--WPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKG 1126
Fly 1127 EQGLQGVWGQ-PGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYP---GDRGDKGEPGLSGLPGL 1187
Fly 1188 KGETGPVGLQGFT----GAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGL 1248
Fly 1249 TGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDI------GPRGEIGYPGVTIKGEKGLPGRPGR 1307
Fly 1308 NGRQGLIGAPGLIGERGLPG--LAGEPGLVG-------------LPGPIGPAGSKGERGLAGS-- 1355
Fly 1356 -PGQPGQDGFP---------GAPGLKGDTGPQGFKGERGLNG------FEGQKGD---------- 1394
Fly 1395 -----KGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQ 1454
Fly 1455 KG----------EPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGER---GLI 1506
Fly 1507 GETGNVGRPGPKGDRGEPGERGYEGAIGLIGQKGEPGAPAPAALDYLTGILITRHSQSETVPACS 1571
Fly 1572 AGHTELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTN 1636
Fly 1637 AAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGG 1701
Fly 1702 GGQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFE-RPQQQTIKAGERQ 1765
Fly 1766 SHVSRCQVCMKN 1777 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Col4a1 | NP_723044.1 | Collagen | 104..161 | CDD:189968 | 30/62 (48%) |
Collagen | 322..380 | CDD:189968 | 32/76 (42%) | ||
Collagen | 413..465 | CDD:189968 | 26/52 (50%) | ||
Collagen | 499..561 | CDD:189968 | 29/61 (48%) | ||
Collagen | 574..632 | CDD:189968 | 20/57 (35%) | ||
Collagen | 657..714 | CDD:189968 | 29/56 (52%) | ||
Collagen | 765..824 | CDD:189968 | 28/61 (46%) | ||
Collagen | 854..911 | CDD:189968 | 27/56 (48%) | ||
Collagen | 884..943 | CDD:189968 | 22/58 (38%) | ||
Collagen | 923..982 | CDD:189968 | 26/58 (45%) | ||
Collagen | 1028..1085 | CDD:189968 | 30/56 (54%) | ||
Collagen | 1229..1287 | CDD:189968 | 23/63 (37%) | ||
Collagen | 1318..1376 | CDD:189968 | 32/84 (38%) | ||
Collagen | 1399..1458 | CDD:189968 | 30/68 (44%) | ||
Collagen | 1477..1534 | CDD:189968 | 22/59 (37%) | ||
C4 | 1555..1662 | CDD:128421 | 62/106 (58%) | ||
C4 | 1663..1777 | CDD:128421 | 72/114 (63%) | ||
COL4A2 | NP_001837.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 60..237 | 86/187 (46%) | |
Collagen | 67..121 | CDD:189968 | 25/53 (47%) | ||
Triple-helical region | 184..1484 | 600/1459 (41%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 271..448 | 78/178 (44%) | |||
Collagen | 293..346 | CDD:189968 | 26/52 (50%) | ||
Collagen | 493..548 | CDD:189968 | 27/59 (46%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 507..640 | 68/175 (39%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 690..906 | 106/245 (43%) | |||
Collagen | 791..849 | CDD:189968 | 29/72 (40%) | ||
Collagen | 821..880 | CDD:189968 | 35/88 (40%) | ||
Collagen | 857..916 | CDD:189968 | 33/73 (45%) | ||
Collagen | 896..950 | CDD:189968 | 27/56 (48%) | ||
Collagen | 1033..1088 | CDD:189968 | 31/57 (54%) | ||
Collagen | 1107..1165 | CDD:189968 | 29/73 (40%) | ||
Collagen | 1155..1212 | CDD:189968 | 25/61 (41%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1157..1480 | 130/339 (38%) | |||
Collagen | 1341..1394 | CDD:189968 | 26/52 (50%) | ||
C4 | 1490..1594 | CDD:279721 | 59/103 (57%) | ||
C4 | 1598..1709 | CDD:279721 | 69/111 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 164 | 1.000 | Domainoid score | I3938 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H1390 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2460 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.750 |