Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009300870.1 | Gene: | col7a1 / 100332562 | ZFINID: | ZDB-GENE-030131-2427 | Length: | 3112 | Species: | Danio rerio |
Alignment Length: | 1780 | Identity: | 719/1780 - (40%) |
---|---|---|---|
Similarity: | 866/1780 - (48%) | Gaps: | 306/1780 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 VIAGALVGADAQFWKTAGTAGSIQDSVKHYNRNEPKFPIDDSYDIVDSAGVARGDLPPKNCTAGY 77
Fly 78 AGCVPKC-------IAEKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPG-PYGQRGDKG 134
Fly 135 ERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEK 199
Fly 200 GEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGE---RGDSGPYGAKGPRGEHGL--KGEK 259
Fly 260 GASCYGPMKPGAPGI------KGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGR--KGEPG 316
Fly 317 PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDR------------------GEPGLN 363
Fly 364 GLPGNPGQKGEPGRAGATGKPGLLGPPGPPG-----GGRGTPGPPGPKGPRGYVGAPGPQGLNGV 423
Fly 424 --DGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGP--------------- 471
Fly 472 IGHPGPPGPEGQKGDAGLPGY-GIQGSKGDA---------GIPGYPGLKGSKGERGFKGNAGAPG 526
Fly 527 D------------SKLGRPGTPGAAGAPGQKGDAGRPGT------PGQKGDMGIKGDVGGKCSSC 573
Fly 574 RAGPKGDKGTSGLPGIPGKDGARGPPGE---RGYPGER---GHDGINGQTGP------------- 619
Fly 620 --PGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGP 682
Fly 683 KGEFGFKGEKGLSGAPGN----------DGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKG 737
Fly 738 SFGRSGEKGEPGSCA------------LDEIKM-------------PAKGNKGEPGQTGMPGPPG 777
Fly 778 EDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQP 842
Fly 843 GPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGD-----AGLPGVSG 902
Fly 903 RPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGND--- 964
Fly 965 ------GPKGFAGVTGAPGKRGPA------GIPGVSGAKGDKG--ATGLTGNDGPVGGRGPPGAP 1015
Fly 1016 GLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGD------------ASEKGQKGE 1068
Fly 1069 P-----GPSGLRGDTGPAG--TPGWPGEKGLPGL----------AVHGRAGPPGEKGDQGRSGID 1116
Fly 1117 GRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGL 1181
Fly 1182 SGLPGLKGETGPVGLQGFTGAP---GPKGERGIRGQPGLPAT-------VPDIRGDKGSQGERGY 1236
Fly 1237 TGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDI----GPRGEIGYPGVTIKG 1297
Fly 1298 EKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQ---P 1359
Fly 1360 GQDGFPGAPGLKGDT---GPQGFKGERGLNGF---EGQKGDKGDRGLQGPSGLPGLVGQKGDTGY 1418
Fly 1419 PGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPG 1483
Fly 1484 RPGERGLIGIQGERGEKGERGLIGETGNVGRPGPKGDRGEPGERGYEGAIGLIGQKGEPGAPAPA 1548
Fly 1549 ALDYLTGILITRHSQSETVPACSAG 1573 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Col4a1 | NP_723044.1 | Collagen | 104..161 | CDD:189968 | 30/57 (53%) |
Collagen | 322..380 | CDD:189968 | 29/75 (39%) | ||
Collagen | 413..465 | CDD:189968 | 22/53 (42%) | ||
Collagen | 499..561 | CDD:189968 | 31/88 (35%) | ||
Collagen | 574..632 | CDD:189968 | 32/78 (41%) | ||
Collagen | 657..714 | CDD:189968 | 23/66 (35%) | ||
Collagen | 765..824 | CDD:189968 | 26/58 (45%) | ||
Collagen | 854..911 | CDD:189968 | 27/61 (44%) | ||
Collagen | 884..943 | CDD:189968 | 27/63 (43%) | ||
Collagen | 923..982 | CDD:189968 | 29/67 (43%) | ||
Collagen | 1028..1085 | CDD:189968 | 29/75 (39%) | ||
Collagen | 1229..1287 | CDD:189968 | 28/61 (46%) | ||
Collagen | 1318..1376 | CDD:189968 | 29/63 (46%) | ||
Collagen | 1399..1458 | CDD:189968 | 24/58 (41%) | ||
Collagen | 1477..1534 | CDD:189968 | 26/56 (46%) | ||
C4 | 1555..1662 | CDD:128421 | 5/19 (26%) | ||
C4 | 1663..1777 | CDD:128421 | |||
col7a1 | XP_009300870.1 | vWFA | 33..196 | CDD:294047 | |
fn3 | 225..309 | CDD:278470 | |||
FN3 | 335..409 | CDD:238020 | |||
FN3 | 415..495 | CDD:238020 | |||
FN3 | 505..577 | CDD:214495 | |||
fn3 | 592..660 | CDD:278470 | |||
FN3 | 680..>740 | CDD:238020 | |||
FN3 | 776..854 | CDD:238020 | |||
fn3 | 862..938 | CDD:278470 | |||
fn3 | 953..1021 | CDD:278470 | |||
fn3 | 1040..1120 | CDD:278470 | |||
VWA | 1134..1300 | CDD:278519 | 10/33 (30%) | ||
Collagen | 1335..1393 | CDD:189968 | 27/57 (47%) | ||
Collagen | 1405..1462 | CDD:189968 | 26/68 (38%) | ||
Collagen | 1450..1511 | CDD:189968 | 28/64 (44%) | ||
Collagen | 1483..1553 | CDD:189968 | 33/77 (43%) | ||
Collagen | 1586..1644 | CDD:189968 | 22/57 (39%) | ||
Collagen | 1653..1708 | CDD:189968 | 22/54 (41%) | ||
Collagen | 1692..1749 | CDD:189968 | 23/56 (41%) | ||
Collagen | 1725..1782 | CDD:189968 | 21/56 (38%) | ||
Collagen | 1758..1809 | CDD:189968 | 21/50 (42%) | ||
Collagen | 1835..1894 | CDD:189968 | 25/61 (41%) | ||
Collagen | 2120..2180 | CDD:189968 | 28/61 (46%) | ||
Collagen | 2156..2216 | CDD:189968 | 29/72 (40%) | ||
Collagen | 2243..2297 | CDD:189968 | 25/56 (45%) | ||
Collagen | 2276..2330 | CDD:189968 | 21/53 (40%) | ||
Collagen | 2362..2420 | CDD:189968 | 30/57 (53%) | ||
Collagen | 2410..2473 | CDD:189968 | 24/62 (39%) | ||
Collagen | 2457..2518 | CDD:189968 | 25/60 (42%) | ||
Collagen | 2596..2657 | CDD:189968 | 27/60 (45%) | ||
Collagen | 2661..2724 | CDD:189968 | 31/73 (42%) | ||
Collagen | 2704..2761 | CDD:189968 | 28/59 (47%) | ||
Collagen | 2734..2792 | CDD:189968 | 27/57 (47%) | ||
Collagen | 2788..2846 | CDD:189968 | 29/63 (46%) | ||
KU | 3057..3110 | CDD:238057 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |