DRSC/TRiP Functional Genomics Resources

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Protein Alignment vkg and COL27A1

DIOPT Version :9

Sequence 1:NP_001260071.1 Gene:vkg / 33726 FlyBaseID:FBgn0016075 Length:1940 Species:Drosophila melanogaster
Sequence 2:NP_116277.2 Gene:COL27A1 / 85301 HGNCID:22986 Length:1860 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vkgNP_001260071.1 Collagen 60..119 CDD:189968
Collagen 102..152 CDD:189968
Collagen 277..334 CDD:189968
Collagen 534..593 CDD:189968
Collagen 814..871 CDD:189968
Collagen 957..1014 CDD:189968
Collagen 990..1049 CDD:189968
Collagen 1070..1128 CDD:189968
C4 1515..1624 CDD:128421
C4 1625..1737 CDD:128421
COL27A1NP_116277.2 LamG 45..220 CDD:304605
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 278..608
Triple-helical region 625..1618
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 625..772
Collagen 694..752 CDD:189968
Collagen 724..783 CDD:189968
Collagen 760..809 CDD:189968
Collagen 832..890 CDD:189968
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 851..1625
Collagen 916..990 CDD:189968
Collagen 1146..1199 CDD:189968
Collagen 1376..1433 CDD:189968
Collagen 1478..1535 CDD:189968
Collagen 1517..1575 CDD:189968
COLFI 1661..1859 CDD:295304
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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