Sequence 1: | NP_001260071.1 | Gene: | vkg / 33726 | FlyBaseID: | FBgn0016075 | Length: | 1940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017212581.1 | Gene: | col4a6 / 554268 | ZFINID: | ZDB-GENE-101001-2 | Length: | 1717 | Species: | Danio rerio |
Alignment Length: | 1875 | Identity: | 750/1875 - (40%) |
---|---|---|---|
Similarity: | 920/1875 - (49%) | Gaps: | 323/1875 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 VVYLLGSLVSVTLAD---GKICNTTLCDCKGIKGRMGAPGPIGVPGLEGPAGDIGPPGRAGPLGE 76
Fly 77 KGDVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPGPR---GIDGCDGRPGMQGPSGAPG 138
Fly 139 QNGVRGPPGKPGQQGPPGEAGEGGINSKG--TKGNRGETGQPGGVGPPGFDGDRGSKGDTGYAGL 201
Fly 202 TGEKGDPGLPGP--KGDTGAVSELPYSLIGPPGAKGEP-----GDSLSGVLKPDDTLKGYKGYVG 259
Fly 260 LQGDEGPQGPTGE---QGAVGRNGLP----GARGEIGGPGERGKPGKDGE------PGRFGDKGM 311
Fly 312 KGAPGWTGADGLDGSPGERGEDGFT---GMPGVQGGAGPPG-IYDPSLTKSLPGPI--------- 363
Fly 364 GSQGDIGPPGEQGPP------GLPGKPGRRGPIG-LAGQSGDPGLNGSRGPPGRSERGEAG--DY 419
Fly 420 GFIGPPGPQGPPGEAGLPGRYGLHGEPGQN---VVGPKGEPGLNGQPGLEGYRGDRGEVGLPGDK 481
Fly 482 G----LPGEGYNIVGPPGSQGPPGFRGLP------GDDGYNGLRGLPGEKGLRGDDCPVCNAGPR 536
Fly 537 GPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGK 601
Fly 602 AIEVGSLRKGEIGDTGDS--GHRGDTGDDGEKGRDGSDGSKGERGETGQRGD------------- 651
Fly 652 -------------YGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDT 703
Fly 704 GFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGE-----QGAIGLRGEIGDRGPAGE---- 759
Fly 760 --VIPGPVGAKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRS 822
Fly 823 GIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRN 887
Fly 888 GRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGE 952
Fly 953 RGEIGYNGRQGDIGPRGPNGEFGPKG-----------LSGDDGPDGYPGANGLPGRKGETGNPGF 1006
Fly 1007 PGRPG----------AKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKGQRGPVGDS-QPALDGVA 1060
Fly 1061 GRKGEVGSPGPNG----LPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLG---GYPGRNGINGLKG 1118
Fly 1119 ATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGEQGE---------QGDEGEVGIP 1174
Fly 1175 GRLENLRDRSFYRGFTGDQGLQGERGEQGDMGPIGFIGPPGAKGERGDIGYAGQLGFDGAEGLKG 1239
Fly 1240 FQGDQGPRGPPGIT-LPAEKGDEGVAGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGPQIQG 1303
Fly 1304 PPGP-QGDVGFPGAPGHNGRHGLIGPKGELGDMGRQGERGESGYAIVGRQGDIGDIGFQGEPGWD 1367
Fly 1368 GAKGEQGYPGLPGKNGRVGAPGPRGPTGDAGWGGIDGMDGLVGPKGQPGVTYSYSM-AR--PGDR 1429
Fly 1430 GEPGLDGFQGEEGDGGAPGLIGFQGQRGAVGYRGDQGEVGYTGADGPQGQRGDKGYMGLTGAPGL 1494
Fly 1495 RGLPGPQGEPA-PAPPAPKSR----GFIFARHSQSVHVPQCPANTNLLWEGYSLSGNVAASRAVG 1554
Fly 1555 QDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCV 1619
Fly 1620 VCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVI 1684
Fly 1685 ECHG-HGRCNYYDALASFWLTVIEEQDQFVQ-PRQQTLKAD-FTSKISRCTVCRR 1736 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vkg | NP_001260071.1 | Collagen | 60..119 | CDD:189968 | 27/58 (47%) |
Collagen | 102..152 | CDD:189968 | 27/52 (52%) | ||
Collagen | 277..334 | CDD:189968 | 25/66 (38%) | ||
Collagen | 534..593 | CDD:189968 | 25/58 (43%) | ||
Collagen | 814..871 | CDD:189968 | 21/56 (38%) | ||
Collagen | 957..1014 | CDD:189968 | 29/77 (38%) | ||
Collagen | 990..1049 | CDD:189968 | 29/68 (43%) | ||
Collagen | 1070..1128 | CDD:189968 | 27/64 (42%) | ||
C4 | 1515..1624 | CDD:128421 | 48/108 (44%) | ||
C4 | 1625..1737 | CDD:128421 | 61/115 (53%) | ||
col4a6 | XP_017212581.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6613 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 1 | 1.100 | - | - | O | PTHR24023 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.820 |