Sequence 1: | NP_001260071.1 | Gene: | vkg / 33726 | FlyBaseID: | FBgn0016075 | Length: | 1940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_694013.8 | Gene: | col4a3 / 553354 | ZFINID: | ZDB-GENE-070802-4 | Length: | 1664 | Species: | Danio rerio |
Alignment Length: | 1824 | Identity: | 729/1824 - (39%) |
---|---|---|---|
Similarity: | 899/1824 - (49%) | Gaps: | 275/1824 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 LLGVVYLLGSLVSVTLADGKI-CN-TTLCDCKGIKGR------------------MGAPGPIGVP 56
Fly 57 GLEGPAGDIGPPGRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTP---GP 118
Fly 119 RGIDGCDGRPGMQGPSG-------APGQNGVRGPPGKPGQQGPPGEAG-EGGINSKGTKGNRGET 175
Fly 176 GQPGGVGPPGFDGDRGSKGDT----GYAGLTGEKGDPGLPGPKGDTGAVSELPYSLIGPPGAKGE 236
Fly 237 PGDSLSGVLKPDDTLKGYKGYVGLQGDEGPQGPTGEQGAVGRNGLPGARGEIGGPGERGKPGKDG 301
Fly 302 EPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFTGMP-----------GVQGGAGPPGIYDPSL 355
Fly 356 TKSLPGPIGSQGDIGPPGEQGPPGLP-----GKPGRRGPIGLAGQSGDPGLNGSRGPPGRSERGE 415
Fly 416 AGDYGFIGPPGPQGPPGEAGLPGRYGLHGEPGQNVVGPKGEPGLNGQPGLEGYRGDRGEVGLPGD 480
Fly 481 KGLPGEGYNI----VGPPGSQGPPGFRGLPGDDGYNGLRGLPGEKGLRGDDCPVCNAGPRGPRGQ 541
Fly 542 EGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVG 606
Fly 607 SLRKGEIGDTGDSGHRGDTGDDGEK-----GRDGSDGSKGERGETGQRGDYGDAGYQGR------ 660
Fly 661 -DGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEP 724
Fly 725 GEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGYPGPTGDY-----GQQGAPG 784
Fly 785 LPGRD---GEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIK---GFPGDVGAPG--QYGLAG 841
Fly 842 RPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLG 906
Fly 907 QNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPN 971
Fly 972 GEFGPKGLSGDDGPDGYPGANGLPGRKGETGNPGFPGRPGAKGVAAYSGIKGDDGESGLTGPIGY 1036
Fly 1037 PGAPGAKGQRGPVGDSQPALDGVAGRKGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQ--GRPGEP 1099
Fly 1100 GAKGLGGYPGRNGINGLKGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGEQGE 1164
Fly 1165 QGDEGEVGIPGRLENLRDRSFYRGFTGDQGLQGERGEQG-DMGPIGFIGPPGAKGERGD-----I 1223
Fly 1224 GYAGQLGFDGAEGLKGFQGDQGPRGPPGITLPAEKGDEGVAGLDGRAGRPGHFGQKGAPGPPGE- 1287
Fly 1288 -NGPNGAIGHRGPQ-IQGPPGPQGDVGFPGAPGHNGRHGLIGPKGELGDMGRQGERGESGYAIVG 1350
Fly 1351 RQGDIGDIGFQGEPGWDGAKGEQGYPGLPGKNGRVGAPGPRGPTGDAGWGGIDGMDGLVGPKGQP 1415
Fly 1416 GVTYSYSM-ARPGDRGEPGLDGFQGEEGDGGAPGLIGF---QGQRGAVGYRGDQGEVGYTGADGP 1476
Fly 1477 QGQRGDKGYMGLTGAPGLRGLPGPQGEPAPAPPAPKSRGFIFARHSQSVHVPQCPANTNLLWEGY 1541
Fly 1542 SL---SGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTM 1603
Fly 1604 TPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNL 1668
Fly 1669 VSPGSCLEEFRAQPVIECHGHGRCNYYDALASFWLTVIEEQDQFVQPRQQTLKADFTSKISRCTV 1733
Fly 1734 CRRR 1737 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vkg | NP_001260071.1 | Collagen | 60..119 | CDD:189968 | 27/61 (44%) |
Collagen | 102..152 | CDD:189968 | 26/59 (44%) | ||
Collagen | 277..334 | CDD:189968 | 23/56 (41%) | ||
Collagen | 534..593 | CDD:189968 | 26/58 (45%) | ||
Collagen | 814..871 | CDD:189968 | 25/61 (41%) | ||
Collagen | 957..1014 | CDD:189968 | 28/56 (50%) | ||
Collagen | 990..1049 | CDD:189968 | 26/58 (45%) | ||
Collagen | 1070..1128 | CDD:189968 | 24/59 (41%) | ||
C4 | 1515..1624 | CDD:128421 | 54/111 (49%) | ||
C4 | 1625..1737 | CDD:128421 | 55/111 (50%) | ||
col4a3 | XP_694013.8 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 136 | 1.000 | Domainoid score | I4876 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |