Sequence 1: | NP_001260071.1 | Gene: | vkg / 33726 | FlyBaseID: | FBgn0016075 | Length: | 1940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
Alignment Length: | 1789 | Identity: | 781/1789 - (43%) |
---|---|---|---|
Similarity: | 971/1789 - (54%) | Gaps: | 182/1789 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 CKGIKGRMGAPGPIGVPGLEGPAGDIGPPGRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMGYP 104
Fly 105 GIMGKSGEPGTPGPRGIDGCDGR---PGMQGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINSK 166
Fly 167 GTKGNRGETGQPGGVGPPGFDGDRGSKGDTGYAGLTGEKGDPGLPGPKGDTGAVSELPYSLIGP- 230
Fly 231 ----PGAKGEPGDSLSGV-LKPDDTL---------KGYKGYVGLQGDEGPQGPTGEQGAVGRNGL 281
Fly 282 PGARGEIGGPGERGKPGKDGEPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAG 346
Fly 347 PPGIYDPSLTKSLPGPIGSQGDIGPPGEQGPPGLPGKPGRRGPIGLAGQSGDPGLNGSRGPPG-R 410
Fly 411 SERGEA---------GDYGFIGPPGPQGPPGEAGLPGRYGLHGEPGQNVVGPKGEPGLNGQPGLE 466
Fly 467 GYRGDRGEVGLPGDKGLPGEGYNIVGPPGSQGPPGFRGLPGDDGYNGLRGLPGEKGLRGD---DC 528
Fly 529 PVCNAGPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKV 593
Fly 594 GAAGPDGKAIEVG-------SLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGD 651
Fly 652 YGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQ 716
Fly 717 IYD-------NTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGYPGPT 774
Fly 775 GDYGQQGA---PGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQ 836
Fly 837 YGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGP---KGQPGRNGRQAPHGAKGQ 898
Fly 899 KGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQG 963
Fly 964 DIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGRKGETGNPGFP---GRPGAKGVAAYSGIKGDD 1025
Fly 1026 GESGL---TGPIGYPGAPGAKGQRGPVGDSQPALDGVAGRKGEVGSPGPNGLPGRHGLKGQRGDR 1087
Fly 1088 GLPGQQGRPGEPGAKGLGGYPGRNGINGLKGATGFPGP---QGPKGPQGESGVVGLDGRNGQIGD 1149
Fly 1150 QGPRGLIGEQGEQGEQGDEGEVGIPGRLENLRDRSFYRGFTGDQGLQGER---GEQGDMGPIGFI 1211
Fly 1212 GPPGAKGERGDIGYAGQLGFDGAEGLKGFQGDQGPRGP---PGITLPAEKGDEGVAGLDGR---A 1270
Fly 1271 GRPGHFGQKGAPG----P-----PGENGPNGAIGHRGPQIQGPPGPQGDVGFPGAPGHNGRHGLI 1326
Fly 1327 GPKGELGDMGRQGERGESGYAIVGRQGDIGDIGFQGE---PGWDGAKGEQGYPGLPGKNGRVGAP 1388
Fly 1389 GPRGPTGDAGWGGIDGMDGLVGPKGQPGVTYSYSMARPGDRGEPGLDGFQGEEGDGGAP---GLI 1450
Fly 1451 GFQGQRGAVGYRGDQGEVGYTGADGPQGQRGDKGYMGLTGAPGLRGLPGPQGEPAPAPPAPKSRG 1515
Fly 1516 FIFARHSQSVHVPQCPANTNLLWEGYSL---SGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCDI 1577
Fly 1578 TNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPG 1642
Fly 1643 GWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECHG-HGRCNYYDALASFWLTVI 1706
Fly 1707 EEQDQFVQPRQQTLKA-DFTSKISRCTVCRRRGN 1739 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vkg | NP_001260071.1 | Collagen | 60..119 | CDD:189968 | 28/58 (48%) |
Collagen | 102..152 | CDD:189968 | 26/52 (50%) | ||
Collagen | 277..334 | CDD:189968 | 26/56 (46%) | ||
Collagen | 534..593 | CDD:189968 | 24/58 (41%) | ||
Collagen | 814..871 | CDD:189968 | 23/56 (41%) | ||
Collagen | 957..1014 | CDD:189968 | 29/59 (49%) | ||
Collagen | 990..1049 | CDD:189968 | 34/64 (53%) | ||
Collagen | 1070..1128 | CDD:189968 | 27/60 (45%) | ||
C4 | 1515..1624 | CDD:128421 | 52/111 (47%) | ||
C4 | 1625..1737 | CDD:128421 | 58/113 (51%) | ||
Col4a1 | NP_723044.1 | Collagen | 104..161 | CDD:189968 | 26/56 (46%) |
Collagen | 322..380 | CDD:189968 | 28/63 (44%) | ||
Collagen | 413..465 | CDD:189968 | 23/51 (45%) | ||
Collagen | 499..561 | CDD:189968 | 26/66 (39%) | ||
Collagen | 574..632 | CDD:189968 | 27/66 (41%) | ||
Collagen | 657..714 | CDD:189968 | 26/56 (46%) | ||
Collagen | 765..824 | CDD:189968 | 29/63 (46%) | ||
Collagen | 854..911 | CDD:189968 | 23/56 (41%) | ||
Collagen | 884..943 | CDD:189968 | 25/60 (42%) | ||
Collagen | 923..982 | CDD:189968 | 26/58 (45%) | ||
Collagen | 1028..1085 | CDD:189968 | 29/56 (52%) | ||
Collagen | 1229..1287 | CDD:189968 | 27/57 (47%) | ||
Collagen | 1318..1376 | CDD:189968 | 27/68 (40%) | ||
Collagen | 1399..1458 | CDD:189968 | 33/58 (57%) | ||
Collagen | 1477..1534 | CDD:189968 | 28/56 (50%) | ||
C4 | 1555..1662 | CDD:128421 | 52/111 (47%) | ||
C4 | 1663..1777 | CDD:128421 | 58/113 (51%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45461339 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D18124at33392 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6613 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 1 | 1.100 | - | - | P | PTHR24023 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.750 |