Sequence 1: | NP_001260071.1 | Gene: | vkg / 33726 | FlyBaseID: | FBgn0016075 | Length: | 1940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_958886.1 | Gene: | col1a1b / 325675 | ZFINID: | ZDB-GENE-030131-4400 | Length: | 1449 | Species: | Danio rerio |
Alignment Length: | 1690 | Identity: | 594/1690 - (35%) |
---|---|---|---|
Similarity: | 687/1690 - (40%) | Gaps: | 465/1690 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 LADGKICNTTLC--------------DCKGIKGRMGAPGPIGVPGLEGPAGDIGPPGRAGPLGEK 77
Fly 78 G-DVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPGPRGIDGCDGRPGMQGPSGAPGQNG 141
Fly 142 VRGPPGKPGQQGPPGEAGEGGINSKGTKGNRGETGQPGGVGPPGFDGDRGSKGDTGYAGLTGEKG 206
Fly 207 DPGLPGPKGDTGAVSELPYSLIGPPGAKGEPGDSLSGVLKPDDTLKGYKGYVGLQGDEGPQGPTG 271
Fly 272 EQGAVGRNGLPGARGEIGGPGERGKPGKDGEPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFT 336
Fly 337 GMPGVQGGAGPPGIYDPSLTKSLPGPIGSQGDIGPPGEQGP---PGLPGKPGRRGPIGLAGQSGD 398
Fly 399 PGLNGSRGPPGRSERGEAGDYGFIGPPGPQGPPGEAGLPGRYGLHGEPGQNVVGPKGEPGLNGQP 463
Fly 464 GLEGYRGDRGEVGLPGDKGLPGEGYNIVGPPGSQGPPGFRGLPGDDGYNGLRGLPGEKGLRGDDC 528
Fly 529 PVCNAGPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKV 593
Fly 594 GAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQ 658
Fly 659 GRDGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGE 723
Fly 724 PGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGYPGPTGDYGQQGAPGLPGR 788
Fly 789 DGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQG 853
Fly 854 PDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIG 918
Fly 919 FSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDD 983
Fly 984 GPDGYPGANGLPGRKGETGNPGFPGRPGAKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKGQRGP 1048
Fly 1049 VGDSQPALDGVAGRKGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGI 1113
Fly 1114 NGLKGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGEQGEQGDEGEVGIPGRLE 1178
Fly 1179 NLRDRSFYRGFTGDQGLQGERGEQGDMGPIGFIGPPGAKGERGDIGYAGQLGFDGAEGLKGFQGD 1243
Fly 1244 QGPRGPPGITLPAEKGDEGVAGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGPQIQGPPGPQ 1308
Fly 1309 GDVGFPGAPGHNGRHGLIGPKGELGDMGRQGERGESGYAIVGRQGDIGDIGFQGEPGWDGAKGEQ 1373
Fly 1374 GYPGLPGKNGRVGAPGPRGPTGDAGWGGIDGMDGLVGPKGQPGVTYSYSMARPGDRGEPGLDGFQ 1438
Fly 1439 GEEGDGGAPGLIGFQGQRGAVGYRGDQGEVGYTGADGPQGQRGDKGYMGLTGAPGLRGLPGPQGE 1503
Fly 1504 PAPAPPAPKSRGFIFARHSQSVHVPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFT 1568
Fly 1569 TMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVC--ET-TTRIIAL 1630
Fly 1631 HSQ--------SMSIPDCPGGW--EEMWTGYSY-----------------FMSTLDNVGGVGQNL 1668
Fly 1669 1668 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vkg | NP_001260071.1 | Collagen | 60..119 | CDD:189968 | 23/59 (39%) |
Collagen | 102..152 | CDD:189968 | 27/49 (55%) | ||
Collagen | 277..334 | CDD:189968 | 25/56 (45%) | ||
Collagen | 534..593 | CDD:189968 | 29/58 (50%) | ||
Collagen | 814..871 | CDD:189968 | 23/56 (41%) | ||
Collagen | 957..1014 | CDD:189968 | 23/56 (41%) | ||
Collagen | 990..1049 | CDD:189968 | 22/58 (38%) | ||
Collagen | 1070..1128 | CDD:189968 | 18/57 (32%) | ||
C4 | 1515..1624 | CDD:128421 | 23/111 (21%) | ||
C4 | 1625..1737 | CDD:128421 | 15/71 (21%) | ||
col1a1b | NP_958886.1 | VWC | 33..88 | CDD:214564 | 3/10 (30%) |
Collagen | 223..282 | CDD:189968 | 29/74 (39%) | ||
Collagen | 433..491 | CDD:189968 | 32/61 (52%) | ||
Collagen | 463..522 | CDD:189968 | 30/65 (46%) | ||
Collagen | 511..582 | CDD:189968 | 36/102 (35%) | ||
Collagen | 617..667 | CDD:189968 | 21/58 (36%) | ||
Collagen | 898..957 | CDD:189968 | 31/98 (32%) | ||
Collagen | 1066..1137 | CDD:189968 | 35/83 (42%) | ||
COLFI | 1215..1448 | CDD:279718 | 35/168 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |