DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vkg and emb-9

DIOPT Version :9

Sequence 1:NP_001260071.1 Gene:vkg / 33726 FlyBaseID:FBgn0016075 Length:1940 Species:Drosophila melanogaster
Sequence 2:NP_001022662.2 Gene:emb-9 / 176314 WormBaseID:WBGene00001263 Length:1759 Species:Caenorhabditis elegans


Alignment Length:1834 Identity:792/1834 - (43%)
Similarity:967/1834 - (52%) Gaps:192/1834 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LSGLLGVVYLLGSL----VSVTLADG-KICNTTLCDCKGIKGRMGAPGPIGVPGLEGPAGDIGPP 68
            |.||...|.||.|.    :.|..|.. |.| ...|.|.|.||..|.||..|.||..|..|..||.
 Worm     6 LLGLTAAVVLLSSFCQDRIHVDAAAACKGC-APPCVCPGTKGERGNPGFGGEPGHPGAPGQDGPE 69

  Fly    69 GRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPGPRGIDGC---DGRPGM 130
            |..|..|..|..|::|:.|.||.|||.|..|..|:||:.|..|.||..|..||.||   ||.|||
 Worm    70 GAPGAPGMFGAEGDFGDMGSKGARGDRGLPGSPGHPGLQGLDGLPGLKGEEGIPGCNGTDGFPGM 134

  Fly   131 QGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINSKGTKGNRGETGQPGGVGPPGFDGDRGSKGD 195
            .|.:|.|||:|..|.||:||..|||   ||||:||:|.||.:||:|:.|..|.|         |:
 Worm   135 PGLAGPPGQSGQNGNPGRPGLSGPP---GEGGVNSQGRKGVKGESGRSGVPGLP---------GN 187

  Fly   196 TGYAGLTGEKGDP---GLPGPKGDTGAVSEL---------PYSLIGPPGAKGEPGDSLSGVLKP- 247
            :||.||.|.||||   ||||..|.:|....:         ...|.||||..|:|| |.....|| 
 Worm   188 SGYPGLKGAKGDPGPYGLPGFPGVSGLKGRMGVRTSGVKGEKGLPGPPGPPGQPG-SYPWASKPI 251

  Fly   248 -DDTLKGYKGYVGLQGDEGPQGPTGEQGAVGRNGLP------GARGEIGGPGERGKPGKDGEPGR 305
             .:.|:|..|..|::|::|..||.|..|.:|.:|.|      |.:|::|..|:|||.||||.||.
 Worm   252 EMEVLQGPVGPAGVKGEKGRDGPVGPPGMLGLDGPPGYPGLKGQKGDLGDAGQRGKRGKDGVPGN 316

  Fly   306 FGDKGMKGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAGPPGIYDPSLTKSLPGPIGSQGDIG 370
            :|:||.:|..|..|..|..|:.|..||.|:.|.||.:|..||.|.......::  ||.|:||..|
 Worm   317 YGEKGSQGEQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPEGPLGEGTGEA--GPHGAQGFDG 379

  Fly   371 PPGEQGPP---GLPGKPGRRGPIGLAGQSGDPGLNGSRGPPGRSERGEAGDYGFIGPPGPQGPPG 432
            ..|.:|.|   ||||..|.|||:|..|..|.||::|..|...:.:|||.|..||.|.||..|.||
 Worm   380 VQGGKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGEPG 444

  Fly   433 EAGLPGRYGLHGEPGQNVVGPKGEPGLNGQPGLEGYRGDRGEVGLP---GDKGLPGEGYNIVGPP 494
            :.|.||..||   ||.::.||   |||:||.|.:|:.|..|::|.|   |:||.||.|.|.||||
 Worm   445 DCGYPGEDGL---PGYDIQGP---PGLDGQSGRDGFPGIPGDIGDPGYSGEKGFPGTGVNKVGPP 503

  Fly   495 GSQGPPGFRGLPGDDGYNGLRGLPGEKGLRGDDCPVCNAGPRGPRGQEGDTGYPGSHGNRGAIGL 559
            |..|.||..|:||..|.:|..|.||..|.||:||..|   |.|..|..||.|:||.:|..|..|.
 Worm   504 GMTGLPGEPGMPGRIGVDGYPGPPGNNGERGEDCGYC---PDGVPGNAGDPGFPGMNGYPGPPGP 565

  Fly   560 TGPR---GVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGH 621
            .|..   |:.|..|.||.||..||.|..|:||.||..|..|..|:.  ||.:.    ...|..|.
 Worm   566 NGDHGDCGMPGAPGKPGSAGSDGLSGSPGLPGIPGYPGMKGEAGEI--VGPME----NPAGIPGL 624

  Fly   622 RGDTGDDGEKGRDGSDGSKGERGETGQRGD---YGDAGYQGRDGEPGRDGRDGAPGRNATTPKVY 683
            :||.|..|..||.||||..|..|..||.|.   .|:.|..|.||:.||.|..|.||... .|...
 Worm   625 KGDHGLPGLPGRPGSDGLPGYPGGPGQNGFPGLQGEPGLAGIDGKRGRQGSLGIPGLQG-PPGDS 688

  Fly   684 LIGEPGYDGIKGERGDDGDTGFKGVKGE---PNPGQIYDN-TGEPGEDGYTGPKGVKGAKGEQGA 744
            ..|:||..|.|||||.||..|..|.:|.   |.|.:|.:. .|:||.|      |:.|..|::||
 Worm   689 FPGQPGTPGYKGERGADGLPGLPGAQGPRGIPAPLRIVNQVAGQPGVD------GMPGLPGDRGA 747

  Fly   745 IGLRGEIGDRGPAGEVIPGPVGAKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQ 809
            .||.|           :|||||..||||..|:.|..|.||.||..||||:      :||:|..|.
 Worm   748 DGLPG-----------LPGPVGPDGYPGTPGERGMDGLPGFPGLHGEPGM------RGQQGEVGF 795

  Fly   810 EVIQGEIGPPGRSGIKGFPGDVGAPGQYGL-----AGRPGPK---GVKGEQGPDGAVGQTGLPGN 866
            ..|.|:.|.||..|..|.||..||||:.|.     .|.|||.   |..|..||||..|:.||||.
 Worm   796 NGIDGDCGEPGLDGYPGAPGAPGAPGETGFGFPGQVGYPGPNGDAGAAGLPGPDGYPGRDGLPGT 860

  Fly   867 KGQRGDF-LVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAG 930
            .|..|:. :.|..|..||||..|.....|..|:||..|:.|..||:|..   |:||..|..|..|
 Worm   861 PGYPGEAGMNGQDGAPGQPGSRGESGLVGIDGKKGRDGTPGTRGQDGGP---GYSGEAGAPGQNG 922

  Fly   931 LQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIG-P--RGPNGEFGPKGLSGDDGPDGYPGAN 992
            :.|.||:||..|.||..|:.|..|..|..|..|.:| |  ||.:|:.|..||.|:.|.:|..|.:
 Worm   923 MDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGEHGDNGLPGLEGECGEEGSRGLD 987

  Fly   993 GLPGRKGETGNPGFPGRPGAKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKGQRGPVGD-SQPAL 1056
            |:||..||.|..|.||.|||            ||:.|..|..|.||.||.:||.|..|: :.|  
 Worm   988 GVPGYPGEHGTDGLPGLPGA------------DGQPGFVGEAGEPGTPGYRGQPGEPGNLAYP-- 1038

  Fly  1057 DGVAGRKGEVGSPGPN---GLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGINGLKG 1118
                |:.|:||.|||:   ||||:.||.|..|:||..| ...||.||..|..|..|.:|::|:.|
 Worm  1039 ----GQPGDVGYPGPDGPPGLPGQDGLPGLNGERGDNG-DSYPGNPGLSGQPGDAGYDGLDGVPG 1098

  Fly  1119 ATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGEQGEQGDEGEVGIPGRLENLRDR 1183
            ..|:||..|..|.:||||:.||.||.|..|..|..||.||.||.|..|..|:.|.||: :.....
 Worm  1099 PPGYPGITGMPGLKGESGLPGLPGRQGNDGIPGQPGLEGECGEDGFPGSPGQPGYPGQ-QGREGE 1162

  Fly  1184 SFYRGFTGDQGLQGERGEQGD---MGPIGFIGPPGAKGERGDIGYAGQLGFDGAEGLKGFQGDQG 1245
            ..|.|..|:.||.|.||:.|.   .|..|..|.||..|..|.:|..|.:|:.||.|..|..|:||
 Worm  1163 KGYPGIPGENGLPGLRGQDGQPGLKGENGLDGQPGYPGSAGQLGTPGDVGYPGAPGENGDNGNQG 1227

  Fly  1246 PRGPPGITLPAEKGDEGVAGLDGRAGRPGHF---GQKGAPGPPGEN--GPNGAIGHRG------- 1298
            ..|.||  |..|.|..|..||.||.|:||..   |..|.||.||::  ||.|..|..|       
 Worm  1228 RDGQPG--LRGESGQPGQPGLPGRDGQPGPVGPPGDDGYPGAPGQDIYGPPGQAGQDGYPGLDGL 1290

  Fly  1299 ---PQIQGPPGPQGDVGFPGAPGHNGRHGLIGPKGELGDMGRQGERGESGY----------AIVG 1350
               |.:.|.||..|..|.||.||..|..||.|..||.|..|..|:||..|.          .:.|
 Worm  1291 PGAPGLNGEPGSPGQYGMPGLPGGPGESGLPGYPGERGLPGLDGKRGHDGLPGAPGVPGVEGVPG 1355

  Fly  1351 RQGDIGDIGFQGEPGWDGAK---GEQGYPGLPGKNGR---------VGAPGPRGPTGDAGWGGID 1403
            .:||.|:.|:.|.||..|:.   ||:|.||:||:.||         .|.||.:||.||.|:.|.|
 Worm  1356 LEGDCGEDGYPGAPGAPGSNGYPGERGLPGVPGQQGRSGDNGYPGAPGQPGIKGPRGDDGFPGRD 1420

  Fly  1404 GMDGLVGPKGQPGVTYSYSMARPGDRGEPGLDGFQGEEGDGGAPGLIGFQGQRGAVGYRGDQGEV 1468
            |:|||.|..|:.|:....:||.....|:||.:|:.||:|..|.||..|..|..|..||.|..|..
 Worm  1421 GLDGLPGRPGREGLPGPMAMAVRNPPGQPGENGYPGEKGYPGLPGDNGLSGPPGKAGYPGAPGTD 1485

  Fly  1469 GY---TGADGPQGQRGDKGYMGLTGAPGLRGLPGPQGEP-APAPPAPKSRGFIFARHSQSVHVPQ 1529
            ||   .|..|..|..||:|:.|..|..|..||||..|.| :|...|| ||||.||:|||:..|||
 Worm  1486 GYPGPPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAP-SRGFTFAKHSQTTAVPQ 1549

  Fly  1530 CPANTNLLWEGYSL---SGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSL 1591
            ||...:.|||||||   .||   .||.||||||.|||:.:|.|||:|.|::.:|||.:..||.|.
 Worm  1550 CPPGASQLWEGYSLLYVQGN---GRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSF 1611

  Fly  1592 WLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMS 1656
            ||||.|||...|.|:.|..:..|||||.|||..|:|||:|||..|:|.||.||..||||||:.|.
 Worm  1612 WLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMH 1676

  Fly  1657 TLDNVGGVGQNLVSPGSCLEEFRAQPVIECHGHGRCNYYDALASFWLTVIEEQDQFVQPRQQTLK 1721
            |.....|.||:|.|||||||||||.|.|||||.|.||||.....|||:::::..||.:|..||||
 Worm  1677 TAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGRGTCNYYATNHGFWLSIVDQDKQFRKPMSQTLK 1741

  Fly  1722 A-DFTSKISRCTVC 1734
            | ....::|||.||
 Worm  1742 AGGLKDRVSRCQVC 1755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vkgNP_001260071.1 Collagen 60..119 CDD:189968 26/58 (45%)
Collagen 102..152 CDD:189968 28/52 (54%)
Collagen 277..334 CDD:189968 27/62 (44%)
Collagen 534..593 CDD:189968 27/61 (44%)
Collagen 814..871 CDD:189968 29/64 (45%)
Collagen 957..1014 CDD:189968 27/59 (46%)
Collagen 990..1049 CDD:189968 25/58 (43%)
Collagen 1070..1128 CDD:189968 26/60 (43%)
C4 1515..1624 CDD:128421 62/111 (56%)
C4 1625..1737 CDD:128421 63/111 (57%)
emb-9NP_001022662.2 Collagen 61..119 CDD:189968 25/57 (44%)
Collagen 97..154 CDD:189968 28/56 (50%)
Collagen 267..325 CDD:189968 25/57 (44%)
Collagen 357..417 CDD:189968 26/61 (43%)
Collagen 391..451 CDD:189968 29/59 (49%)
Collagen 423..485 CDD:189968 31/67 (46%)
Collagen 473..535 CDD:189968 30/61 (49%)
Collagen 655..717 CDD:189968 26/62 (42%)
Collagen 731..789 CDD:189968 32/80 (40%)
Collagen 841..900 CDD:189968 25/58 (43%)
Collagen 895..953 CDD:189968 24/60 (40%)
Collagen 984..1041 CDD:189968 28/74 (38%)
Collagen 1107..1166 CDD:189968 25/59 (42%)
Collagen 1143..1202 CDD:189968 21/59 (36%)
Collagen 1194..1249 CDD:189968 24/56 (43%)
Collagen 1346..1405 CDD:189968 19/58 (33%)
Collagen 1379..1437 CDD:189968 26/57 (46%)
Collagen 1468..1527 CDD:189968 24/58 (41%)
C4 1536..1642 CDD:279721 59/108 (55%)
C4 1645..1758 CDD:128421 63/111 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160118
Domainoid 1 1.000 129 1.000 Domainoid score I3285
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28661
OrthoDB 1 1.010 - - D41315at33208
OrthoFinder 1 1.000 - - FOG0000443
OrthoInspector 1 1.000 - - oto19833
orthoMCL 1 0.900 - - OOG6_100768
Panther 1 1.100 - - O PTHR24023
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.860

Return to query results.
Submit another query.