Sequence 1: | NP_001260071.1 | Gene: | vkg / 33726 | FlyBaseID: | FBgn0016075 | Length: | 1940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011533739.1 | Gene: | COL19A1 / 1310 | HGNCID: | 2196 | Length: | 1167 | Species: | Homo sapiens |
Alignment Length: | 1115 | Identity: | 390/1115 - (34%) |
---|---|---|---|
Similarity: | 483/1115 - (43%) | Gaps: | 297/1115 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 CDCKGIKGRMGAPGPIGVPGLEGPAGDIGPPGRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMG 102
Fly 103 YPGIMGKSGEPGTPGPRGIDGCDGRPGMQGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINSKG 167
Fly 168 TKGNRGETGQPGGVGPPGFDGDRGSKGDTGYAGLTGEKGDPGLPGPKGDTGAVSELPYSLIGPPG 232
Fly 233 AKGEPGDSLSGVLKPDDTLKGYKGYVGLQGDEGPQGPTGEQGAVGRNGLPGARGEIGGPGERGKP 297
Fly 298 GKDGEPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAGPPGIYDPSLTKSLPGP 362
Fly 363 IGSQGDIGPPGEQGPPGLPGKPGRRGPIGLAGQSGDPGLNGSRGPPGRSERGEAGDYGFIGPPGP 427
Fly 428 QGPPGEAGLPGRYGLHGEPGQNVVGPKGEPGLNGQPGLEGYRGDRGEVGLPGDKGLPGEGYNIVG 492
Fly 493 PPGSQGPPGFRGLPGDDGYNGLRGLPGEKGLRGDDCPVCNAGPRGPRGQEGDTGYPGSHGNRGAI 557
Fly 558 GLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHR 622
Fly 623 GDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYLIGE 687
Fly 688 PGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIG 752
Fly 753 DRGPAGEVIPGPVGAKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEI- 816
Fly 817 -----GPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVG 876
Fly 877 PPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIP 941
Fly 942 GLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGRKGETGNPGF 1006
Fly 1007 PGRPGAKGVAAYSGIKG----------DDGESGLTGPIGYPG---APGAKGQRGPVGDSQPALDG 1058
Fly 1059 VAGRKGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGINGLKGATGFP 1123
Fly 1124 GPQGPKGPQG 1133 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vkg | NP_001260071.1 | Collagen | 60..119 | CDD:189968 | 22/58 (38%) |
Collagen | 102..152 | CDD:189968 | 17/49 (35%) | ||
Collagen | 277..334 | CDD:189968 | 25/56 (45%) | ||
Collagen | 534..593 | CDD:189968 | 24/58 (41%) | ||
Collagen | 814..871 | CDD:189968 | 29/62 (47%) | ||
Collagen | 957..1014 | CDD:189968 | 25/56 (45%) | ||
Collagen | 990..1049 | CDD:189968 | 18/71 (25%) | ||
Collagen | 1070..1128 | CDD:189968 | 28/57 (49%) | ||
C4 | 1515..1624 | CDD:128421 | |||
C4 | 1625..1737 | CDD:128421 | |||
COL19A1 | XP_011533739.1 | TSPN | 75..258 | CDD:214560 | |
Glutenin_hmw | 299..>691 | CDD:281191 | 189/535 (35%) | ||
Collagen | 317..369 | CDD:189968 | 23/54 (43%) | ||
Collagen | 499..572 | CDD:189968 | 33/84 (39%) | ||
Collagen | 622..684 | CDD:189968 | 31/87 (36%) | ||
Collagen | 932..981 | CDD:189968 | 22/57 (39%) | ||
Collagen | 966..1020 | CDD:189968 | 24/53 (45%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |