Sequence 1: | NP_001260071.1 | Gene: | vkg / 33726 | FlyBaseID: | FBgn0016075 | Length: | 1940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_542411.2 | Gene: | COL11A2 / 1302 | HGNCID: | 2187 | Length: | 1736 | Species: | Homo sapiens |
Alignment Length: | 1623 | Identity: | 588/1623 - (36%) |
---|---|---|---|
Similarity: | 716/1623 - (44%) | Gaps: | 377/1623 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 55 VPGLEGPAGDIGPPGRAGPLGEKGDVGEYGEQGEK----------GHRGDIGPKGEMGYPGIMGK 109
Fly 110 SGEPGTP--GPRGIDGCDG-----RPGM--QGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINS 165
Fly 166 KGTKGNRGETGQPGGVGPPG--------FDGDRGSKGDTGYAGLTGEKGDP------------GL 210
Fly 211 PGPKGDTGAVSELPYSLIGPPGAKGEPGDSLSGVLKPDDTLKGYKGYVGLQGDEGPQGPTGEQGA 275
Fly 276 VGRNGLPGARGEIGGPGERGKPGKDGEPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFTGMPG 340
Fly 341 VQGGAGPPGIYDPSLTKSLPGPIGSQGDIGPPGEQGPPGLPGKPGRRGPIGLAGQSGDPGLNGSR 405
Fly 406 GPPG-RSERGEAGDYGFIGPPGPQGPPGEAGLPGRYGLHGEPGQNVVGPKGEPGLNGQPGLEGYR 469
Fly 470 GDRGEVGLPGDKGLPGEGYNIVGPPGSQGPPGFRGLPGDDGYNGLRGLPGEKGLRGDDCPVCNAG 534
Fly 535 PRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPD 599
Fly 600 GKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEP 664
Fly 665 GRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGY 729
Fly 730 TGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGYPGPTGDYGQQGAPGLPGRDGEPGL 794
Fly 795 DGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVG 859
Fly 860 QTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRG 924
Fly 925 LLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYP 989
Fly 990 GANGLPGR---KGETGNPGFPGRPGAKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKGQRGPVGD 1051
Fly 1052 SQPALDGVAGRKGEVGSPGPNGLPGRHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGINGL 1116
Fly 1117 KGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGEQGEQGDEGEVGIPGRLENLR 1181
Fly 1182 DRSFYRGFTGDQGLQGERGEQGDMGPIGFIGPPGAKGERGDIGYAGQLGFDGAEGLKGFQGDQGP 1246
Fly 1247 RGPPGITLPAEKGDEGVAGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGPQIQGPPGPQGDV 1311
Fly 1312 GFPGAPGHNGRHGLIGPKGELGDMGRQGERGESGYAIVGRQGDIGDIGFQGEPGWDGAKGEQGYP 1376
Fly 1377 GLPGKNGRVGAPGPRGPTGDAGWGGIDGMDGLVGPKGQPGVTYSYSMARPGDRGEPGLDGFQGEE 1441
Fly 1442 GDGGAPGLIGFQGQRGAVGYRGDQGEVGYTGADGPQGQRGDKGYMGLTGAPGLRGLPGPQGEPAP 1506
Fly 1507 APPAPKSR----GFIFARHSQSVHVPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRF 1567
Fly 1568 TT----MPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQG--RDLMKYISRCVVCETT 1624 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vkg | NP_001260071.1 | Collagen | 60..119 | CDD:189968 | 15/70 (21%) |
Collagen | 102..152 | CDD:189968 | 22/58 (38%) | ||
Collagen | 277..334 | CDD:189968 | 24/56 (43%) | ||
Collagen | 534..593 | CDD:189968 | 25/58 (43%) | ||
Collagen | 814..871 | CDD:189968 | 24/56 (43%) | ||
Collagen | 957..1014 | CDD:189968 | 28/59 (47%) | ||
Collagen | 990..1049 | CDD:189968 | 27/61 (44%) | ||
Collagen | 1070..1128 | CDD:189968 | 23/57 (40%) | ||
C4 | 1515..1624 | CDD:128421 | 23/114 (20%) | ||
C4 | 1625..1737 | CDD:128421 | 588/1623 (36%) | ||
COL11A2 | NP_542411.2 | TSPN | 31..213 | CDD:214560 | |
Nonhelical region | 215..486 | 54/191 (28%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 227..303 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 330..465 | 47/140 (34%) | |||
Herpes_ICP4_C | 361..>703 | CDD:332854 | 155/415 (37%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 485..1538 | 512/1335 (38%) | |||
Triple-helical region | 487..1500 | 506/1295 (39%) | |||
Collagen | 499..558 | CDD:189968 | 30/76 (39%) | ||
Collagen | 541..600 | CDD:189968 | 33/88 (38%) | ||
Collagen | 654..710 | CDD:189968 | 27/58 (47%) | ||
Collagen | 688..745 | CDD:189968 | 28/66 (42%) | ||
Collagen | 805..862 | CDD:189968 | 24/58 (41%) | ||
DNA_pol3_gamma3 | <1264..1437 | CDD:331207 | 89/272 (33%) | ||
Collagen | 1303..1362 | CDD:189968 | 30/69 (43%) | ||
COLFI | 1540..1735 | CDD:197483 | 22/94 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |