Sequence 1: | NP_001260071.1 | Gene: | vkg / 33726 | FlyBaseID: | FBgn0016075 | Length: | 1940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001837.2 | Gene: | COL4A2 / 1284 | HGNCID: | 2203 | Length: | 1712 | Species: | Homo sapiens |
Alignment Length: | 1894 | Identity: | 764/1894 - (40%) |
---|---|---|---|
Similarity: | 929/1894 - (49%) | Gaps: | 347/1894 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 RDLRHLSG-------LLGVVYLLGSLVSVTLA---------DGKICNTTLCDCKGIKGRMGAPGP 52
Fly 53 IGVPGLEGPAGDIGPPGRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPG 117
Fly 118 PR---GIDGCDGRPGMQGPSGAPGQNGVRGPP---GKPGQQGPP------------GEAGEGG-I 163
Fly 164 NSKGTKGNRGETGQ---------PGGVGPPGFDGDRGSKGDTGYAGLTGEKGDPGLPGPKG---D 216
Fly 217 T-------GAVSELPYSLIGPPGAKGEPGDSLSGV-LKPDDTLKGY---KGYVGL---------- 260
Fly 261 --------QGDEGPQGPTGEQGAVGRNGLP----------GARGEIGGPGERGKPGKDGEPGRFG 307
Fly 308 DKGMKGAPGWTGADG--LDGSPGERGEDGFTGMPGVQGGAGPPGIYDPSLTKSLPGPIGSQGDIG 370
Fly 371 PPGEQGPPGLPGKPGRRGPI----GLAGQSGDPGLNGS---RGPPG-RSERGEA----GDYGFIG 423
Fly 424 PPGPQGPPGEAGLPGRYGLHGEPGQNVVGPKGEPGLNGQPGLEGYRGDRGEVGLPGDKGLPGEGY 488
Fly 489 NIV-----GPPGSQGPPGFRGLPGDDGYNGLRGLPGEKGLRGDDCPVCNAGPRGPRGQEGDTGYP 548
Fly 549 GSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVG---SLRK 610
Fly 611 GEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGR 675
Fly 676 NATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTG-----PKGV 735
Fly 736 KGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGYPGPTGDYGQQGAPGLPGRDGEPGLDGGIGY 800
Fly 801 KGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPG 865
Fly 866 NKGQRG-DFLVGPPGPK---GQPGRNGRQAPHGAKGQKGEVGSLGQNGQNGAKGSIGFSGRRGLL 926
Fly 927 GNAGLQGLPGSPGIPG-----LPGMIGEIGERGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPD 986
Fly 987 GYPGANGLPGR-------KGETGNPGFPGRPGAKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKG 1044
Fly 1045 QRGPVGDSQPALDGVAGRKGEVGSPGPNG-------LPGRHGLKGQRGDRGLPGQQGRPGEPGAK 1102
Fly 1103 GLGGYPGRNGIN------GLKGATGFPGPQGPKGPQGESGVVGLDGRNGQIGDQGPRGLIGEQGE 1161
Fly 1162 QGEQGDEGEVGIPGRLENLRDRSFYRGFT--------GDQGLQGERGEQGDMGPIGFI-GPPGAK 1217
Fly 1218 GERGDIGYAGQLGFDGAEGLKGFQGDQGPRGPPGITLPAEKGDEGVAGLDGRAGRPGHFGQKGAP 1282
Fly 1283 GPPGENGPNGAIGHRGPQIQGPPGPQGDVGFPGAPGHNGRHGLI---GPKGELGDMGRQGERGES 1344
Fly 1345 GYAIVGRQGDIGDIGFQGEPGWDGAKGEQGYPGLPGKNGRVGAPGPRG-PTGDAGWGGIDGMDGL 1408
Fly 1409 VGPKGQPGVTYSYSMARPGDRGEPGLDGFQGEEGDGGAPGLIGFQGQRGAV----GYRGDQGEVG 1469
Fly 1470 YTGADGPQGQRGDKGYMGLTGAPGLRGLPGPQGEPAPAPPAPKSRGFIFARHSQSVHVPQCPANT 1534
Fly 1535 NLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPM 1599
Fly 1600 PMTMTPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGV 1664
Fly 1665 GQNLVSPGSCLEEFRAQPVIECH-GHGRCNYYDALASFWLTVIEEQDQFVQPRQQTLKAD-FTSK 1727
Fly 1728 ISRCTVCRR 1736 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vkg | NP_001260071.1 | Collagen | 60..119 | CDD:189968 | 27/58 (47%) |
Collagen | 102..152 | CDD:189968 | 27/55 (49%) | ||
Collagen | 277..334 | CDD:189968 | 30/68 (44%) | ||
Collagen | 534..593 | CDD:189968 | 27/58 (47%) | ||
Collagen | 814..871 | CDD:189968 | 25/56 (45%) | ||
Collagen | 957..1014 | CDD:189968 | 27/63 (43%) | ||
Collagen | 990..1049 | CDD:189968 | 27/65 (42%) | ||
Collagen | 1070..1128 | CDD:189968 | 33/70 (47%) | ||
C4 | 1515..1624 | CDD:128421 | 50/108 (46%) | ||
C4 | 1625..1737 | CDD:128421 | 61/114 (54%) | ||
COL4A2 | NP_001837.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 60..237 | 75/180 (42%) | |
Collagen | 67..121 | CDD:189968 | 25/56 (45%) | ||
Triple-helical region | 184..1484 | 579/1478 (39%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 271..448 | 77/198 (39%) | |||
Collagen | 293..346 | CDD:189968 | 15/52 (29%) | ||
Collagen | 493..548 | CDD:189968 | 27/62 (44%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 507..640 | 60/148 (41%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 690..906 | 98/235 (42%) | |||
Collagen | 791..849 | CDD:189968 | 32/65 (49%) | ||
Collagen | 821..880 | CDD:189968 | 33/64 (52%) | ||
Collagen | 857..916 | CDD:189968 | 25/58 (43%) | ||
Collagen | 896..950 | CDD:189968 | 23/59 (39%) | ||
Collagen | 1033..1088 | CDD:189968 | 27/74 (36%) | ||
Collagen | 1107..1165 | CDD:189968 | 28/57 (49%) | ||
Collagen | 1155..1212 | CDD:189968 | 25/69 (36%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1157..1480 | 151/386 (39%) | |||
Collagen | 1341..1394 | CDD:189968 | 26/57 (46%) | ||
C4 | 1490..1594 | CDD:279721 | 47/105 (45%) | ||
C4 | 1598..1709 | CDD:279721 | 60/110 (55%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.720 |