Sequence 1: | NP_001260071.1 | Gene: | vkg / 33726 | FlyBaseID: | FBgn0016075 | Length: | 1940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034062.3 | Gene: | Col4a2 / 12827 | MGIID: | 88455 | Length: | 1707 | Species: | Mus musculus |
Alignment Length: | 1847 | Identity: | 739/1847 - (40%) |
---|---|---|---|
Similarity: | 890/1847 - (48%) | Gaps: | 282/1847 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 LLGSLVSVTLADGKICNTTL------------------CDCKGIKGRMGAPGPIGVPGLEGPAGD 64
Fly 65 IGPPGRAGPLGEKGDVGEYGEQGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPGPRGIDGCDGRPG 129
Fly 130 MQGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINSKGTKGN-RGETGQPGGVGPPGFDGDRGSK 193
Fly 194 GDTGYAGLTGEKGDPGLPGPKGDTGAVSELPYSLIGPPGAKGEPGDSLSGVLKPDDTLKGYKGYV 258
Fly 259 GLQGDEGPQGPT----------GEQGAVGRNGLPG--ARGE---IGGPGERGKPGKDGEPGRFGD 308
Fly 309 KGMKGAPGWTGADGLDGSPGERGEDGFTGMPGVQGGAGPPGIYD--PSLTKSLPGPIGSQGDIGP 371
Fly 372 PGEQGPPGLPGKPGRRGPI--------GLAGQSGDPGLNGSRGPPGRSERGEAGDYGFIGPPGPQ 428
Fly 429 GPPGEAGLPG----RYGLHGEPGQ-NVVGPKGEPGLNGQPGLEGYRGD--RGEV-----GLPGDK 481
Fly 482 GLPGEGYNIVGPPGSQGPPGFRGLPGDDGYN---GLRGLPGEKGLRGDDCPVCNAGPRGP----- 538
Fly 539 -RGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGE---PGKVGAAGPD 599
Fly 600 GKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDA--------- 655
Fly 656 --GYQGRDGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGER------GDDGDTGFKGVKGEP 712
Fly 713 NPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEI-----GDRGPAGEVIPGPVGAKGYPG 772
Fly 773 PTGD---YGQQGAPGLPGRDGEPGLDGGIGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAP 834
Fly 835 GQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAPHGAKGQK 899
Fly 900 GEVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIG------- 957
Fly 958 ----YNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGR-------KGETGNPGFPGRPG 1011
Fly 1012 AKGVAAYSGIKGDDGESGLTGPIGYPGAPGAKGQRGPVGDSQPALDGVAGRKGEVGSPGPNGLPG 1076
Fly 1077 RHGLKGQRGDRGLPGQQGRPGEPGAKGLGGYPGRNGI------NGLKGATGFPGPQGPKGPQGES 1135
Fly 1136 GVVGLDGRNGQIGDQGPRGLIGEQGEQGEQGDEGEVGIPGRLENLRDRSFYRGFTGDQGLQGERG 1200
Fly 1201 EQGDMGPIGFIGPPGAKGERGDIG-YAGQLGFDGAEGLKGFQGDQGPRGPPGIT-LPAEKGDEGV 1263
Fly 1264 AGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGPQIQGPPGPQGDVGFPGAPGHNGRHGLIGP 1328
Fly 1329 KGELGDMGRQGERGESGYAIVGRQGDIGDIGFQGEPGWDGAKGEQGYPGLPGKNGRVGAPG-PR- 1391
Fly 1392 -----GPTGDAGWGGIDGMDGLVGPKGQPGVTYSYSMARPGDRGEPGLDGFQGEEGDGGAPGLIG 1451
Fly 1452 FQGQRGAVGYRGDQGEVGYTGADGPQGQRGDKGYMGLTGAPGLRGLPGPQGEPAPAPPAPKSRGF 1516
Fly 1517 IFARHSQSVHVPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCDITNVC 1581
Fly 1582 HFAQNNDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEE 1646
Fly 1647 MWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECH-GHGRCNYYDALASFWLTVIEEQD 1710
Fly 1711 QFVQPRQQTLKAD-FTSKISRCTVCRR 1736 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vkg | NP_001260071.1 | Collagen | 60..119 | CDD:189968 | 27/58 (47%) |
Collagen | 102..152 | CDD:189968 | 24/49 (49%) | ||
Collagen | 277..334 | CDD:189968 | 30/61 (49%) | ||
Collagen | 534..593 | CDD:189968 | 30/67 (45%) | ||
Collagen | 814..871 | CDD:189968 | 24/56 (43%) | ||
Collagen | 957..1014 | CDD:189968 | 29/74 (39%) | ||
Collagen | 990..1049 | CDD:189968 | 29/65 (45%) | ||
Collagen | 1070..1128 | CDD:189968 | 31/63 (49%) | ||
C4 | 1515..1624 | CDD:128421 | 50/108 (46%) | ||
C4 | 1625..1737 | CDD:128421 | 60/114 (53%) | ||
Col4a2 | NP_034062.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 60..253 | 89/213 (42%) | |
Collagen | 67..121 | CDD:189968 | 25/56 (45%) | ||
Triple-helical region | 184..1479 | 561/1443 (39%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 266..476 | 92/223 (41%) | |||
Collagen | 312..387 | CDD:189968 | 36/84 (43%) | ||
Collagen | 489..543 | CDD:189968 | 24/54 (44%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 524..900 | 156/412 (38%) | |||
Collagen | 783..842 | CDD:189968 | 30/63 (48%) | ||
Collagen | 864..921 | CDD:189968 | 24/58 (41%) | ||
Collagen | 900..959 | CDD:189968 | 25/58 (43%) | ||
Collagen | 1007..1070 | CDD:189968 | 27/62 (44%) | ||
Collagen | 1102..1161 | CDD:189968 | 30/58 (52%) | ||
Collagen | 1147..1206 | CDD:189968 | 28/71 (39%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1195..1476 | 122/333 (37%) | |||
Collagen | 1324..1383 | CDD:189968 | 26/63 (41%) | ||
C4 | 1485..1589 | CDD:279721 | 47/105 (45%) | ||
C4 | 1594..1704 | CDD:279721 | 59/109 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8822 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.720 |