Sequence 1: | NP_001260071.1 | Gene: | vkg / 33726 | FlyBaseID: | FBgn0016075 | Length: | 1940 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004916922.2 | Gene: | col4a5 / 100492984 | XenbaseID: | XB-GENE-6041869 | Length: | 1691 | Species: | Xenopus tropicalis |
Alignment Length: | 1799 | Identity: | 764/1799 - (42%) |
---|---|---|---|
Similarity: | 914/1799 - (50%) | Gaps: | 223/1799 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 ADGKIC----NTTLCDCKGIKGRMGAPGPIGVPGLEGP---AGDIGPPGRAGPLGEKGDVGEYGE 85
Fly 86 QGEKGHRGDIGPKGEMGYPGIMGKSGEPGTPGPRGIDGCDGRPGMQGPSGAPGQN---GVRGPPG 147
Fly 148 KPGQQGPPGEAGEGGINSKGTKGNRGETGQPGGVGPPGFDGDRGSKGDTGYAGLTGEKGDPGLPG 212
Fly 213 PKGDTGAVSELPYSLIGPPGAKGEPG--------DSLSGVLKPDDTL-KGYKGYVGLQGDEGPQG 268
Fly 269 PTGEQGAVGRNGLPGARGEIGGPGERGKPGKDGEPGRFGDKGMKGAPGWTGADGLDGSPGERGED 333
Fly 334 GFTGMPGV------QGGAGPPGIYDPSLTKSLPGPIGSQGDIGPPGEQGPPGLPGKPGRR--GPI 390
Fly 391 GLAGQSGDPGLNGSRGPPGRSERGEAGDYGFIGPPGPQGPPGEAGLPGRYGLHGEPGQNVVGPKG 455
Fly 456 EPGLNGQPGLEGYRGDRGEVGLPGDKGLPGEGYNIVGPPGSQGPPGFRGLPGDDGYNGLRGLPGE 520
Fly 521 KGLRGDDCPVC-NAGPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPA 584
Fly 585 GIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETG-- 647
Fly 648 -QRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGERGDDGDTGFKGVKGE 711
Fly 712 PNPGQIYDNTGE------PGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGEVIPGPVGAKGY 770
Fly 771 PGPTGDYGQQGAPGLPGRDGEPGLDG--------GIGYKGQRGVPGQEVIQGEIGPPGRSGIKGF 827
Fly 828 PGDVGAPGQYGLAGRPGPKGVKGEQGPDGAVGQTGLPGNKGQRGDFLVGPPGPKGQPGRNGRQAP 892
Fly 893 ---HGAKGQKGEVGSLG--QNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGE 952
Fly 953 RGEIGYNGRQGDIGPRGPNGEFGPKGLSGDDGPDGYPGANGLPGRKGETGNPGFPGRPGAKGVA- 1016
Fly 1017 -AYSGIKGD---DGESGLTGPIGYPGAPGAKGQRGPVGDSQPALDGVAGRKGEVGSPGPNGLPGR 1077
Fly 1078 HGLKGQRGDRGL---PGQQGRPGEPGAKGLGGYPGRNGINGLKG-----ATGFPGPQGPKGPQGE 1134
Fly 1135 SGVVGLDGRNGQIGDQGPRGLIGEQGEQGEQGDEGEVGIPGR--LENLRDRSFYRGFTGDQGLQG 1197
Fly 1198 ERGEQGDMGPIGFIGPPGAKGERGDIGYAGQLGFDGAEGLKGFQGDQGPRGPPGITLPAEKGDEG 1262
Fly 1263 VAGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHRGPQIQGP---PGPQGDVGFPGAPGHNGRHG 1324
Fly 1325 LIGPKGELGDMGRQGERGESGY----AIVGRQGDIGDIGFQGE---PGWDGAKGEQGYPGLPGKN 1382
Fly 1383 GRVGAPGPRGPTGDAGWGGIDGMDGLVGPKGQPGVTYSYSMARPGDRGE-------PGLDGFQGE 1440
Fly 1441 EGDGGAPGLIGFQGQRGAVGYRGDQGEVGYTGADGPQGQRGDKGYMGLTGAPGLRGLPGP---QG 1502
Fly 1503 EPAPAPPAPKSRGFIFARHSQSVHVPQCPANTNLLWEGYSL---SGNVAASRAVGQDLGQSGSCM 1564
Fly 1565 MRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIA 1629
Fly 1630 LHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECHGHGRCNY 1694
Fly 1695 YDALASFWLTVIEEQDQFVQPRQQTLKA-DFTSKISRCTVCRRR 1737 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vkg | NP_001260071.1 | Collagen | 60..119 | CDD:189968 | 29/61 (48%) |
Collagen | 102..152 | CDD:189968 | 26/52 (50%) | ||
Collagen | 277..334 | CDD:189968 | 28/56 (50%) | ||
Collagen | 534..593 | CDD:189968 | 26/58 (45%) | ||
Collagen | 814..871 | CDD:189968 | 27/56 (48%) | ||
Collagen | 957..1014 | CDD:189968 | 27/56 (48%) | ||
Collagen | 990..1049 | CDD:189968 | 28/63 (44%) | ||
Collagen | 1070..1128 | CDD:189968 | 28/65 (43%) | ||
C4 | 1515..1624 | CDD:128421 | 64/111 (58%) | ||
C4 | 1625..1737 | CDD:128421 | 59/112 (53%) | ||
col4a5 | XP_004916922.2 | Collagen | 704..749 | CDD:396114 | 20/44 (45%) |
Collagen | 751..801 | CDD:396114 | 24/52 (46%) | ||
Med15 | 899..>1240 | CDD:312941 | 146/351 (42%) | ||
Collagen | 1092..1148 | CDD:396114 | 22/61 (36%) | ||
Collagen | 1122..1177 | CDD:396114 | 22/60 (37%) | ||
C4 | 1468..1574 | CDD:396133 | 61/108 (56%) | ||
C4 | 1578..1688 | CDD:396133 | 58/109 (53%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 135 | 1.000 | Domainoid score | I4934 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24023 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.110 |