DRSC/TRiP Functional Genomics Resources

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Protein Alignment vkg and col27a1a

DIOPT Version :9

Sequence 1:NP_001260071.1 Gene:vkg / 33726 FlyBaseID:FBgn0016075 Length:1940 Species:Drosophila melanogaster
Sequence 2:NP_001156766.1 Gene:col27a1a / 100004688 ZFINID:ZDB-GENE-100119-1 Length:1783 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vkgNP_001260071.1 Collagen 60..119 CDD:189968
Collagen 102..152 CDD:189968
Collagen 277..334 CDD:189968
Collagen 534..593 CDD:189968
Collagen 814..871 CDD:189968
Collagen 957..1014 CDD:189968
Collagen 990..1049 CDD:189968
Collagen 1070..1128 CDD:189968
C4 1515..1624 CDD:128421
C4 1625..1737 CDD:128421
col27a1aNP_001156766.1 LamG 41..220 CDD:304605
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..312
HC2 326..481 CDD:284736
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..524
Triple-helical region. /evidence=ECO:0000255 553..1547
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 553..744
Collagen 656..712 CDD:189968
Collagen 689..745 CDD:189968
Collagen 725..782 CDD:189968
Collagen 761..819 CDD:189968
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 772..1461
Collagen 1121..1180 CDD:189968
Collagen 1154..1212 CDD:189968
Collagen 1269..1326 CDD:189968
Collagen 1377..1436 CDD:189968
Collagen 1410..1467 CDD:189968
Collagen 1443..1500 CDD:189968
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1512..1546
COLFI 1589..1783 CDD:295304
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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