DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SelT and Selenot

DIOPT Version :10

Sequence 1:NP_608897.1 Gene:SelT / 33725 FlyBaseID:FBgn0031670 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_001014275.2 Gene:Selenot / 365802 RGDID:1359128 Length:195 Species:Rattus norvegicus


Alignment Length:189 Identity:77/189 - (40%)
Similarity:115/189 - (60%) Gaps:5/189 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVLCLCAGYALVFAEGEKE---IPVTKFGQNIA--PTMTFLYCYSCGYRKAFEDYVGLLGEKYP 70
            ||:|.|.|..|:|.:|....   :|..:.....|  |.:.|..|.|.|||:.||:|:.::.::||
  Rat     3 LLLLLLVAASAVVRSEASANLGGVPSKRLKMQYATGPLLKFQICVSUGYRRVFEEYMRVISQRYP 67

  Fly    71 QIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQANKIYACMMI 135
            .|::.|.||.|..:..:::..:...|:::|..::....||.|.|:..||.|...|.||:|||||:
  Rat    68 DIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMV 132

  Fly   136 FFLGNMLEAQLISSGAFEITLNDVPVWSKLQTGRFPSPEVLFQIIDNHLQFTEKVQENP 194
            |||.||:|.|.:|:||||||||||||||||::|..||.:.|.||:||.::....:...|
  Rat   133 FFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMKLNVHMDSIP 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SelTNP_608897.1 CXXU_selWTH 44..182 CDD:274013 63/137 (46%)
SelenotNP_001014275.2 CXXU_selWTH 41..179 CDD:274013 63/137 (46%)

Return to query results.
Submit another query.