DRSC/TRiP Functional Genomics Resources

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Protein Alignment SelT and selenot1b

DIOPT Version :10

Sequence 1:NP_608897.1 Gene:SelT / 33725 FlyBaseID:FBgn0031670 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_840077.4 Gene:selenot1b / 352921 ZFINID:ZDB-GENE-030411-1 Length:193 Species:Danio rerio


Alignment Length:184 Identity:73/184 - (39%)
Similarity:111/184 - (60%) Gaps:3/184 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVLCLCAGYALVFAEGEKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGEKYPQIQVN 75
            |||..|...:|.......|::.:...|   .|.:.|..|.| |||:.||:|..:|.::||.|::.
Zfish     9 LLVCVLSVNHATADNGSIKKMKMQYTG---FPLLKFQICVSUGYRRVFEEYTRVLTQRYPDIRIE 70

  Fly    76 GGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQANKIYACMMIFFLGN 140
            |.|:.|..|..:::..:...|:::|..::...:|||:|.:.||..|...|.||||.|.|:|||.|
Zfish    71 GENFLPQPLYRHIASFLSVFKLVVIGLIILGKNPFTYLHIETPGIWLWAQENKIYTCTMVFFLSN 135

  Fly   141 MLEAQLISSGAFEITLNDVPVWSKLQTGRFPSPEVLFQIIDNHLQFTEKVQENP 194
            |:|.|.:|:||||:||||||||||||:|..||.:.|.||::|.::.:..:...|
Zfish   136 MIENQCMSTGAFEVTLNDVPVWSKLQSGHLPSMQQLVQILENEMKLSVHMDSLP 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SelTNP_608897.1 CXXU_selWTH 44..182 CDD:274013 63/137 (46%)
selenot1bNP_840077.4 None

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