DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rtnl1 and BTI1

DIOPT Version :9

Sequence 1:NP_001162875.1 Gene:Rtnl1 / 33721 FlyBaseID:FBgn0053113 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001328059.1 Gene:BTI1 / 828463 AraportID:AT4G23630 Length:275 Species:Arabidopsis thaliana


Alignment Length:202 Identity:51/202 - (25%)
Similarity:88/202 - (43%) Gaps:35/202 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 LIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTV------AFRIYKSVTQAVQK 472
            :..|::.|.||.|.|      .|.:::.|..:..| .||||...|      ...::.:.|..:.|
plant    92 IFMWKNKKMSGGVLG------GATAAWVVFELMEY-HLLTLLCHVMIVVLAVLFLWSNATMFINK 149

  Fly   473 TNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVI---LWVF 534
            :....|       ::.:..|.:..:|......||...|.||.:....|:   .||.:.   |||.
plant   150 SPPKIP-------EVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL---KKFLIAIAGLWVL 204

  Fly   535 TYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSID-----THLDLVRSKLTEITDKIRVAIPIG- 593
            :.:|..||.:||..:|.|.|||:|..|:..:..:|     ..::| :.:...:.:|:...||:| 
plant   205 SILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIEL-KKQYAVLDEKVLSKIPLGP 268

  Fly   594 --NKKPE 598
              |||.:
plant   269 LKNKKKD 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rtnl1NP_001162875.1 Reticulon 411..575 CDD:280592 43/174 (25%)
BTI1NP_001328059.1 Reticulon 89..245 CDD:396837 43/169 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 65 1.000 Domainoid score I3611
eggNOG 1 0.900 - - E1_KOG1792
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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