Protein Alignment Rtnl1 and Prr18

DIOPT Version :9

• Sequence 1: NP_001162875.1
• Gene: Rtnl1 / 33721
• FlyBaseID: FBgn0053113
• Length: 607
• Species: Drosophila melanogaster
• Sequence 2: XP_006227993.1
• Gene: Prr18 / 361481
• RGDID: 1564079
• Length: 413
• Species: Rattus norvegicus
• Alignment Length: 349
• Identity: 73/349 - (20%)
• Similarity: 97/349 - (27%)
• Gaps: 155/349 - (44%)

  Fly   102 AGKEVKQGISGLTTDFMNAERGFSAPLAPFSETVAQAPVIPAQAPAVPDHAPAV----------P 156
            ||:.:...:.|....|        :|:.|        |..|...||.....||.          |
  Rat   101 AGRTLMLRLLGRVMSF--------SPMPP--------PPPPPPPPARTQGGPAARQLSRRPCGPP 149

  Fly   157 APVAPAPAVPAP-----LPVEEDL-------------------LGSFTDQPSAPLQAFQPTAPST 197
            |...||||..|.     .|.|..|                   ||..|.||  |..|..|..||.
  Rat   150 AASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQP--PTSARVPPQPSP 212

  Fly   198 ANFYDDEEDDFLGKPTTAA-------------PAAPVAPLTKANQDSDTESP---SVSYTPSPAK 246
                        |:..|:|             ||...|..|.|...:..|..   |:|.||
  Rat   213 ------------GRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTP---- 261

  Fly   247 KPIVDALKDQDNEKFISSEDLASDFKEEPRSAPTPAPAPAPILDAAPAVAPAP--------VAVP 303
                :|:      ..|....|.......||     .|.|||..|....:.|.|        ...|
  Rat   262 ----EAI------LVIQRRHLEKQLLARPR-----RPFPAPSADPRRPLVPCPRTRSSTLRRGGP 311

  Fly   304 VSVPVAKPQPVPVAVPVTTALITDLDDEEVVFKPTVQEAPKAPTIAAPVVEPKPEPPKPKVEPAK 368
            .|||.|     |:||.|::                                   .||:..:.|
  Rat   312 TSVPDA-----PLAVAVSS-----------------------------------RPPRASLLP-- 334

  Fly   369 PKVVPVAPVESTQPQPKIASVEEI 392
                  ..:::|.|.|:.:|:..:
  Rat   335 ------GGLQATMPSPRPSSLRPV 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rtnl1	NP_001162875.1	Reticulon	411..575	CDD:280592
Prr18	XP_006227993.1	PRR18	162..413	CDD:292299	54/272 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166351053
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930