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Protein Alignment Rtnl1 and prr18
DIOPT Version :9
Sequence 1: | NP_001162875.1 |
Gene: | Rtnl1 / 33721 |
FlyBaseID: | FBgn0053113 |
Length: | 607 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005156569.1 |
Gene: | prr18 / 101885898 |
ZFINID: | ZDB-GENE-081107-6 |
Length: | 253 |
Species: | Danio rerio |
Alignment Length: | 86 |
Identity: | 20/86 - (23%) |
Similarity: | 34/86 - (39%) |
Gaps: | 18/86 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 RNFDE--LKKEAAATNEDIFKQAQRAYEDSALGGDTGNVSG-------GAQDDNAHTEHYFANEQ 58
||.:: :.|:....:.|: :.:|.:......|.:.|.|. |:.|.:|..:....|:|
Zfish 141 RNLEKQMMAKQKCCASADL--RHRRVFPSKRAQGGSNNKSSCPVAKLDGSNDISAIVKISLLNDQ 203
Fly 59 KKLD-------FGDAQEFVQR 72
.|.| .||..|.|.|
Zfish 204 HKYDDVEYEEEDGDVDETVMR 224
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rtnl1 | NP_001162875.1 |
Reticulon |
411..575 |
CDD:280592 |
|
prr18 | XP_005156569.1 |
PRR18 |
41..251 |
CDD:292299 |
20/86 (23%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170592788 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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