DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8891 and rdgB

DIOPT Version :10

Sequence 1:NP_608890.1 Gene:CG8891 / 33718 FlyBaseID:FBgn0031663 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_417429.1 Gene:rdgB / 947429 ECOCYCID:G7530 Length:197 Species:Escherichia coli


Alignment Length:188 Identity:63/188 - (33%)
Similarity:89/188 - (47%) Gaps:14/188 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ITFVTGNAKKLEELVAILGPSFPRTIVSKK---IDLPELQG-DIDEIAIKKCKEAARQVNGPVLV 65
            :...|||..|:.||.::|. .|...||::.   :|..|..| ...|.||.|.:.||:....|.:.
E. coli     4 VVLATGNVGKVRELASLLS-DFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTALPAIA 67

  Fly    66 EDTSLCFNALEGLPGPYIKWFL--EKLQPEGLHRLLHGW-----ENKSAQAICTFGYC-DGVDAE 122
            :|:.|..:.|.|.||.|...:.  :....:.|.:||...     :.:.|:..|...|. ...|..
E. coli    68 DDSGLAVDVLGGAPGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHCVLVYLRHAEDPT 132

  Fly   123 PLIFKGITEGVIV-EPRGPRDFGWDPVFQPSGYDKTYAELPKSEKNTISHRYRALALL 179
            ||:..|...|||. ||.|...||:||:|......||.|||.:.||:.||||.:||.||
E. coli   133 PLVCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAISHRGQALKLL 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8891NP_608890.1 HAM1 5..182 CDD:238285 63/188 (34%)
rdgBNP_417429.1 PRK00120 2..197 CDD:234648 63/188 (34%)

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