DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmd and YGL039W

DIOPT Version :10

Sequence 1:NP_608888.2 Gene:Gmd / 33716 FlyBaseID:FBgn0031661 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_011476.1 Gene:YGL039W / 852844 SGDID:S000003007 Length:348 Species:Saccharomyces cerevisiae


Alignment Length:155 Identity:35/155 - (22%)
Similarity:60/155 - (38%) Gaps:45/155 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VALITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTTRIEHLYADPKAHKGGRMKLHYGDMTD 112
            |..::|.||....::.:.|||..|:|.| ..|:...|...::...::|...              
Yeast     7 VVFVSGATGFIALHVVDDLLKTGYKVIG-SGRSQEKNDGLLKKFKSNPNLS-------------- 56

  Fly   113 SSSLVKIINMVKPTEIYNLAAQSHVK-----------VSFDLSEYTAE--VDAV-GTLRILDAIR 163
                ::|:..:.....::...|.|.|           |.|:.:::..:  :.|| ||..||:||:
Yeast    57 ----MEIVEDIAAPNAFDKVFQKHGKEIKVVLHIASPVHFNTTDFEKDLLIPAVNGTKSILEAIK 117

  Fly   164 TCGMEKNVRFYQASTSELYGKVVET 188
            .         |.|.|.|   |||.|
Yeast   118 N---------YAADTVE---KVVIT 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmdNP_608888.2 Gmd 47..390 CDD:440706 35/155 (23%)
YGL039WNP_011476.1 AR_SDR_e 7..324 CDD:187538 35/155 (23%)

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