DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmd and gmd-2

DIOPT Version :10

Sequence 1:NP_608888.2 Gene:Gmd / 33716 FlyBaseID:FBgn0031661 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_493106.1 Gene:gmd-2 / 186416 WormBaseID:WBGene00010166 Length:382 Species:Caenorhabditis elegans


Alignment Length:350 Identity:240/350 - (68%)
Similarity:287/350 - (82%) Gaps:2/350 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KVALITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTTRIEHLYADPKAHKG-GRMKLHYGDM 110
            ||||||||||||||||||.||.|.|:|||||||:|:|||.||||||.:|..|.| ....||||||
 Worm    34 KVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNGSASFSLHYGDM 98

  Fly   111 TDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSEYTAEVDAVGTLRILDAIRTCGMEKNVRFYQ 175
            ||||.|:|:|:.::|||||:|||||||||||||.|||||||||||||:||||..|.:.:.|||||
 Worm    99 TDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRLTEKVRFYQ 163

  Fly   176 ASTSELYGKVVETPQNEQTPFYPRSPYACAKMYGFWIVINYREAYNMYACNGILFNHESPRRGEN 240
            ||||||||||.|.||:|.||||||||||.|||||:|||:||||||.|:||||||||||||||||.
 Worm   164 ASTSELYGKVQEIPQSELTPFYPRSPYAVAKMYGYWIVVNYREAYKMFACNGILFNHESPRRGET 228

  Fly   241 FVTRKITRSVAKIYHKQMEYFELGNLDSKRDWGHASDYVEAMWMMLQRESPSDYVIATGETHSVR 305
            |||||||||||||..:|.|:.|||||.:.||||||.:||||||.:||:::|.|:|||||:..|||
 Worm   229 FVTRKITRSVAKISLRQQEHIELGNLSALRDWGHAKEYVEAMWRILQQDTPDDFVIATGKQFSVR 293

  Fly   306 EFVEAAFKHIDREITWKGKGVDEVGVENGTGIVRVRINPKYFRPTEVDLLQGDASKANRELNWTP 370
            ||...||..|..::.|:|:|||||| :|..|:|||:::|||:|||||:.|.|:.:||.:.|.|.|
 Worm   294 EFCNLAFAEIGEQLVWEGEGVDEVG-KNQDGVVRVKVSPKYYRPTEVETLLGNPAKARKTLGWEP 357

  Fly   371 KVTFVELVSDMMKADIELMRKNPIA 395
            |:|..|||.:|:.:||.||..:|:|
 Worm   358 KITVPELVKEMVASDIALMEADPMA 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmdNP_608888.2 Gmd 47..390 CDD:440706 237/343 (69%)
gmd-2NP_493106.1 Gmd 34..377 CDD:440706 237/343 (69%)

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