DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL28 and Mrpl28

DIOPT Version :10

Sequence 1:NP_608887.1 Gene:mRpL28 / 33715 FlyBaseID:FBgn0031660 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_077189.2 Gene:Mrpl28 / 68611 MGIID:1915861 Length:257 Species:Mus musculus


Alignment Length:248 Identity:81/248 - (32%)
Similarity:136/248 - (54%) Gaps:10/248 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WKRPGRFDKGLGAQLPEAYRKFWREWKLTTPAAVHYIPKEQQWERDEVTHAIKPVQNIPLPLIDT 79
            |::. |..:|:.|:||..:.:...|.:  ||..|||.|...:::.:......:.|:::|:|:...
Mouse    11 WQKL-RLRQGICARLPAHFLRSLEEER--TPTPVHYKPHGTKFKINPKNGQRERVEDVPIPVHYP 72

  Fly    80 PESHRGIWGGEAVIKGFQ--KREQTKRRVPHFWVPNLRRSVVHSHVLDCYMSVVVTERTLEQIHE 142
            |||.:|:||||.:|.|::  ..::..:||...|.|.|....::|.:||...:|.||.|||:.|.|
Mouse    73 PESQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDLIDE 137

  Fly   143 CHGFDHYLLKNRACDLRSALALKLKREVLQALQNGVPALADE-PERQQEVLKEYRRYLEPYTPEE 206
            .:|||.|:||....||.|...:.|||.:|..|....|.|..| |||:..:..:||.::.|  ..|
Mouse   138 AYGFDFYILKTPKEDLGSKFGMDLKRGMLLRLARQDPHLHPENPERRAAIYDKYRSFVIP--EAE 200

  Fly   207 IDWYGHTYLEAIRKLQKQLREAEKVVPHKLEFRGKLIEQLRQAGISEAGKLEK 259
            .:|.|.|..||:.| |:.|.|.:.|...|: :..:|:::|::..:|....::|
Mouse   201 AEWVGLTLEEALEK-QRLLEEKDPVPLFKV-YVEELVQRLQEQVLSRPAVVQK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL28NP_608887.1 None
Mrpl28NP_077189.2 Ribosomal_L28 <99..136 CDD:459953 14/36 (39%)

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