Sequence 1: | NP_608885.1 | Gene: | CG3756 / 33712 | FlyBaseID: | FBgn0031657 | Length: | 333 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_015435.1 | Gene: | RPC40 / 856226 | SGDID: | S000006314 | Length: | 335 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 302 | Identity: | 142/302 - (47%) |
---|---|---|---|
Similarity: | 204/302 - (67%) | Gaps: | 3/302 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 ADDVFSVQAFKEKLHIKIVRNDEDGLEFDLIGVYPAIANAFRRLMLSDVPSMAIEKVYIYNNTSI 92
Fly 93 IQDEVLAHRMGLLPLRADPRLFAYRTEE--STEAGTEQDTLEFELKVKCSRRRDAGKDQSNFDDI 155
Fly 156 YKNHKVYSGHLKWLPKGKQAQIYSESAVNCIHDDILIAQLRPGHELDLRLVAVKGLGRDHAKFSP 220
Fly 221 VATATYRLLPMIKLNREVTGKDAYLLQNCFSPGVIGIDE-NETAYVKDARYDTCSRNVYRYPQLN 284
Fly 285 DAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRKCRAL 326 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3756 | NP_608885.1 | RNAP_I_II_AC40 | 41..329 | CDD:132910 | 138/289 (48%) |
RPOLD | 53..327 | CDD:214766 | 136/277 (49%) | ||
RPC40 | NP_015435.1 | RNAP_I_II_AC40 | 40..330 | CDD:132910 | 138/289 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157346286 | |
Domainoid | 1 | 1.000 | 269 | 1.000 | Domainoid score | I282 |
eggNOG | 1 | 0.900 | - | - | E1_COG0202 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3586 | |
Inparanoid | 1 | 1.050 | 279 | 1.000 | Inparanoid score | I564 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S590 |
OMA | 1 | 1.010 | - | - | QHG54254 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003669 | |
OrthoInspector | 1 | 1.000 | - | - | oto99941 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102180 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11800 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1180 |
SonicParanoid | 1 | 1.000 | - | - | X2540 | |
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.740 |