Protein Alignment CG3756 and NRPB3

DIOPT Version :9

• Sequence 1: NP_608885.1
• Gene: CG3756 / 33712
• FlyBaseID: FBgn0031657
• Length: 333
• Species: Drosophila melanogaster
• Sequence 2: NP_179145.1
• Gene: NRPB3 / 816035
• AraportID: AT2G15430
• Length: 319
• Species: Arabidopsis thaliana
• Alignment Length: 311
• Identity: 105/311 - (33%)
• Similarity: 160/311 - (51%)
• Gaps: 36/311 - (11%)

  Fly    43 IKIVRNDEDGLEFDLIGVYPAIANAFRRLMLSDVPSMAIEKVYIYNNTSIIQDEVLAHRMGLLPL 107
            |||....:|..:|:|.....::|||.||:|:|:||::||:.|.|..|:|::.||.:|||:||:||
plant    12 IKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPL 76

  Fly   108 RADPRLFAYRTEESTEA-----GTEQDTLEFELKVKCSRRRDAGKDQSNFDDIYKNHKVYSGHLK 167
            .:: |..:.|.....:|     ..|..::||.|..||.  .|...|.::.|       :||..
plant    77 TSE-RAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCV--TDQTLDVTSRD-------LYSAD-- 129

  Fly   168 WLPKGKQAQIYSESAV--NCIHDDILIAQLRPGHELDLRLVAVKGLGRDHAKFSPVATATYRLLP 230
              |.........:|:|  :..|..|:|.:||.|.||.||.:|.||:|:||||:||.||.|:...|
plant   130 --PTVTPVDFTIDSSVSDSSEHKGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAATVTFMYEP 192

  Fly   231 MIKLNREV--TGKDAY---LLQNCFSP-GVIGIDE-NETAYVKDARYDTCSRNVYRYPQLNDAVT 288
            .|.:|.::  |..|..   |:::  || .|.|:|. .....|.|....|....|.:..:......
plant   193 DIIINEDMMDTLSDEEKIDLIES--SPTKVFGMDPVTRQVVVVDPEAYTYDEEVIKKAEAMGKPG 255

  Fly   289 LARIR---DHYIFSVESVGALKPDVIFLEAVKVLKRKCRAL---IDEIEAE 333
            |..|.   |.:||:|||.||:|...:.|.|:.:||:|..|:   .|.:||:
plant   256 LIEISPKDDSFIFTVESTGAVKASQLVLNAIDLLKQKLDAVRLSDDTVEAD 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3756	NP_608885.1	RNAP_I_II_AC40	41..329	CDD:132910	102/305 (33%)
		RPOLD	53..327	CDD:214766	98/293 (33%)
NRPB3	NP_179145.1	RNAP_II_RPB3	10..302	CDD:132909	102/305 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0202
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D834009at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820