DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scox and SCO1

DIOPT Version :9

Sequence 1:NP_608884.1 Gene:Scox / 33711 FlyBaseID:FBgn0262467 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_009593.1 Gene:SCO1 / 852325 SGDID:S000000241 Length:295 Species:Saccharomyces cerevisiae


Alignment Length:258 Identity:93/258 - (36%)
Similarity:144/258 - (55%) Gaps:23/258 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RRW---AQQPAIRHYAAPADST----KGK---GPISW---RSLAVIGALGAGGVGFMLYVKSEKD 64
            |.|   .::|..|   .|...|    .||   |.|.:   :::|:..|:|.....|....|...:
Yeast    38 RLWQSNGKKPLSR---VPVGGTPIKDNGKVREGSIEFSTGKAIALFLAVGGALSYFFNREKRRLE 99

  Fly    65 EARMKERQRQLGKAAIGGSWELVDSQGAVRKSEDFLGKWLLIYFGFTHCPDICPDELEKMAAVVD 129
            ..:..|..|..||.::||.:.|.|..|.....::.|||:.:|||||::|||||||||:|:...::
Yeast   100 TQKEAEANRGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLN 164

  Fly   130 EVEKSPQTPAVQPIFITVDPERDSKEVVAKYVKEFSPKLLGLTGTVEQIRKVCKAFRVYFSAGPR 194
            .: .|.....:||:|||.||.|||..|:.:|:.:|.|.:||||||.::::..||.:|||||..|.
Yeast   165 TL-SSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPN 228

  Fly   195 -DEDNDYIVDHTIIMYLVNPDGEFVDYYGQNRDKDQCVASILVNI-----AKWNSMNKKGWFS 251
             ....||:|||:|..||::|:|:|||..|:|.|:...|..|:.::     |:..:..|:.|:|
Yeast   229 VKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSYVPAEQRAKQKEAWYS 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScoxNP_608884.1 SCO1-SenC 81..217 CDD:396962 62/136 (46%)
SCO1NP_009593.1 Sco1 76..276 CDD:224910 79/200 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344120
Domainoid 1 1.000 140 1.000 Domainoid score I1028
eggNOG 1 0.900 - - E1_COG1999
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3374
Inparanoid 1 1.050 162 1.000 Inparanoid score I1054
Isobase 1 0.950 - 0 Normalized mean entropy S1273
OMA 1 1.010 - - QHG51910
OrthoFinder 1 1.000 - - FOG0002408
OrthoInspector 1 1.000 - - otm46681
orthoMCL 1 0.900 - - OOG6_100983
Panther 1 1.100 - - LDO PTHR12151
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1293
SonicParanoid 1 1.000 - - X1597
TreeFam 1 0.960 - -
1615.740

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